Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03418 and RBAM_021110
See
Amino acid alignment /
Visit
BSNT_03418 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:38
# Commandline: needle
# -asequence dna-align/BSNT_03418___gudB.1.9828.seq
# -bsequence dna-align/RBAM_021110___gudB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03418___gudB-RBAM_021110___gudB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03418___gudB-RBAM_021110___gudB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03418___gudB
# 2: RBAM_021110___gudB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1282
# Identity: 1068/1282 (83.3%)
# Similarity: 1068/1282 (83.3%)
# Gaps: 14/1282 ( 1.1%)
# Score: 4495.0
#
#
#=======================================
BSNT_03418___ 1 ATGGCAGCCGATCGAAACACCGGTCATACAGAAGAGGACAAACTTGATGT 50
|||||||||||||||..|||||||||||..|||||.|||||||.||||||
RBAM_021110__ 1 ATGGCAGCCGATCGATTCACCGGTCATAATGAAGAAGACAAACATGATGT 50
BSNT_03418___ 51 ATTAAAATCAACCCAAACCGTAATACATAAGGCTCTGGAAAAATTGGGAT 100
||||||||||||||||||||||||||||||.|||||||||||||||||.|
RBAM_021110__ 51 ATTAAAATCAACCCAAACCGTAATACATAAAGCTCTGGAAAAATTGGGGT 100
BSNT_03418___ 101 ATCCCGAAGAGGTATACGAATTGTTAAAAGAGCCGATGAGATTATTAACG 150
||||.|||||.||.||.|||.||.|.|||||||||.|.||||||||||||
RBAM_021110__ 101 ATCCAGAAGAAGTGTATGAACTGCTGAAAGAGCCGCTCAGATTATTAACG 150
BSNT_03418___ 151 GTAAAAATACCTGTTCGTATGGACGACGGTTCAGTTAAGATTTTCACAGG 200
||.|||||.||||||||.|||||.|||||.||.||.||.||.||.|||||
RBAM_021110__ 151 GTTAAAATTCCTGTTCGGATGGATGACGGGTCTGTGAAAATATTTACAGG 200
BSNT_03418___ 201 ATATCGTGCGCAGCACAATGACTCTGTCGGTCCAACGAAAGGCGGGATAC 250
.||||||||||||||||||||.||.||.|||||.||.||||||||.||.|
RBAM_021110__ 201 CTATCGTGCGCAGCACAATGATTCCGTAGGTCCGACAAAAGGCGGCATTC 250
BSNT_03418___ 251 GTTTTCACCCGAATGTAACAGAAAAAGAGGTGAAGGCGCTTTCAATTTGG 300
|||||||||||||||||||.||||||||||||||.||.|||||.||.|||
RBAM_021110__ 251 GTTTTCACCCGAATGTAACTGAAAAAGAGGTGAAAGCACTTTCCATCTGG 300
BSNT_03418___ 301 ATGAGTTTAAAATGCGGCATAATTGATCTTCCATATGGCGGTGGTAAAGG 350
|||||||||||||||||.||.|||||||||||.|||||||||||||||||
RBAM_021110__ 301 ATGAGTTTAAAATGCGGAATTATTGATCTTCCTTATGGCGGTGGTAAAGG 350
BSNT_03418___ 351 CGGAATTGTTTGTGATCCAAGGGATATGTCGTTTAGAGAGCTGGAGCGTC 400
||||||||||||||||||.||..|||||||.||.||||||||.||..|.|
RBAM_021110__ 351 CGGAATTGTTTGTGATCCGAGAAATATGTCATTCAGAGAGCTTGAAAGAC 400
BSNT_03418___ 401 TGAGCAGAGGGTATGTCAGAGCGATCAGCCAAATTGTCGGCCCGACAAAA 450
|||||||.||.|||||||||||.|||||.||.||||||||.|||||.|||
RBAM_021110__ 401 TGAGCAGGGGATATGTCAGAGCAATCAGTCAGATTGTCGGACCGACTAAA 450
BSNT_03418___ 451 GACGTGCCGGCACCGGATGTATTTACAAACTCACAAATCATGGCTTGGAT 500
|||||.|||||.||.||.|||||||||||||||||.||.|||||||||||
RBAM_021110__ 451 GACGTCCCGGCGCCTGACGTATTTACAAACTCACAGATTATGGCTTGGAT 500
BSNT_03418___ 501 GATGGATGAGTATTCAAGAATTGATGAATTTAATTCGCCTGGATTTATTA 550
|||||||||.|||||||||||||||||||||||.||.||.||.|||||||
RBAM_021110__ 501 GATGGATGAATATTCAAGAATTGATGAATTTAACTCACCCGGCTTTATTA 550
BSNT_03418___ 551 CAGGCAAACCGCTTGTGCTTGGCGGATCTCACGGGAGAGAATCTGCGACA 600
|.||.|||||||||||.||.||||||||.|||||.||.|||||.|||||.
RBAM_021110__ 551 CGGGAAAACCGCTTGTACTCGGCGGATCCCACGGCAGGGAATCAGCGACG 600
BSNT_03418___ 601 GCAAAAGGTGTTACCATCTGTATTAAAGAAGCGGCTAAGAAGAGAGGCAT 650
||||||||.||.||||||||.||.|||||||||||.|||||.|.|||..|
RBAM_021110__ 601 GCAAAAGGCGTCACCATCTGCATAAAAGAAGCGGCCAAGAAAAAAGGTCT 650
BSNT_03418___ 651 CGATATTAAAGGTGCGCGTGTCGTTGTCCAAGGCTTCGGAAACGCGGGAA 700
|||||||.|....|||||.|||||.||.|||||.||||||||||||||.|
RBAM_021110__ 651 CGATATTCAGAACGCGCGCGTCGTCGTACAAGGTTTCGGAAACGCGGGCA 700
BSNT_03418___ 701 GCTATTTGGCAAAATTTATGCATGATGCGGGGGCAAAAGTTGTCGGCATC 750
|||||.||||.||.|||||||||||.||.||.||.|||||||||||.||.
RBAM_021110__ 701 GCTATCTGGCCAAGTTTATGCATGACGCCGGCGCGAAAGTTGTCGGAATT 750
BSNT_03418___ 751 TCAGATGCGTATGGCGGACTTTATGATCCGGAAGGCCTTGATATCGATTA 800
||.||.|||||.||.||.|||||.||||||||.||.||||||||.|||||
RBAM_021110__ 751 TCTGACGCGTACGGAGGCCTTTACGATCCGGACGGTCTTGATATTGATTA 800
BSNT_03418___ 801 TTTACTCGACCGACGCGACAGCTTCGGTACCGTAACAAAGCTTTTCAACG 850
|.|.||.|||||..|.||||||||||||||.||.||.|||||||||||.|
RBAM_021110__ 801 TCTGCTTGACCGCAGAGACAGCTTCGGTACGGTGACCAAGCTTTTCAATG 850
BSNT_03418___ 851 ATACCATTACCAACCAAGAGCTGCTGGAGCTGGATTGTGATATTCTCGTT 900
|.||||||||.||.||.||||||||.||||||||.||||||||.||.||.
RBAM_021110__ 851 ACACCATTACGAATCAGGAGCTGCTTGAGCTGGACTGTGATATACTTGTC 900
BSNT_03418___ 901 CCTGCTGCGATTGAAAATCAAATTACAGAAGAAAATG-----CCCATAAT 945
||.||.|||||.|||||.|||||||||||||||||.| |.|||.|.
RBAM_021110__ 901 CCGGCGGCGATCGAAAACCAAATTACAGAAGAAAACGCTGACCGCATCAA 950
BSNT_03418___ 946 ATTCGGGCTAAAATTGTCGTTGAAGCAGCGAACGGACCAACAACGCTTGA 995
| ||.|||||.||.||.|||||.||.||||||||.||.||.||.||
RBAM_021110__ 951 A-----GCGAAAATCGTTGTAGAAGCGGCAAACGGACCGACGACACTGGA 995
BSNT_03418___ 996 AGGAACAAAGATTCTTTCAGAC--CGGGACATTCTGCTTGTACCAGACGT 1043
||||||.||.||.||..||||| .||.|| .|||||.||.||.||.||
RBAM_021110__ 996 AGGAACGAAAATCCTGACAGACAAAGGAAC--GCTGCTGGTTCCCGATGT 1043
BSNT_03418___ 1044 GCTGGCAAGTGCCGGTGGCGTAACAGTTTCTTATTTTGAATGGGTTCAGA 1093
.|||||.||.|||||.||.|||||.|||||||||||.|||||||||||.|
RBAM_021110__ 1044 TCTGGCGAGCGCCGGCGGTGTAACGGTTTCTTATTTCGAATGGGTTCAAA 1093
BSNT_03418___ 1094 ATAACCAAGGCTTCTACTGGAGTGAAGAAGAGGTAGAAGAAAAATTAGAA 1143
|.|||||||||||||||||||||||||||||.||.||.||||||.|.|||
RBAM_021110__ 1094 ACAACCAAGGCTTCTACTGGAGTGAAGAAGAAGTCGAGGAAAAACTGGAA 1143
BSNT_03418___ 1144 AAAATGATGGTCAAATCATTTAACAATATTTATGAAATGGCTAACAACCG 1193
||.||||||.|.|||||.|||||.|||||||||||||||.|..|.|||||
RBAM_021110__ 1144 AATATGATGATAAAATCGTTTAATAATATTTATGAAATGTCCCAAAACCG 1193
BSNT_03418___ 1194 AAGAATTGACATGAGGCTCGCTGCATATATGGTCGGCGTTCGCAAAATGG 1243
..|.||||||||||||||.||.||.||.|||||||||||.||.|||||||
RBAM_021110__ 1194 CCGGATTGACATGAGGCTTGCGGCTTACATGGTCGGCGTGCGGAAAATGG 1243
BSNT_03418___ 1244 CTGAAGCTTCGCGTTTTAGAGGCTGGATATAA 1275
|.||.|||||||||||.|||||||||||||||
RBAM_021110__ 1244 CGGAGGCTTCGCGTTTCAGAGGCTGGATATAA 1275
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.