Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03449 and RBAM_021310

See Amino acid alignment / Visit BSNT_03449 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:41
# Commandline: needle
#    -asequence dna-align/BSNT_03449___spmB.1.9828.seq
#    -bsequence dna-align/RBAM_021310___spmB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03449___spmB-RBAM_021310___spmB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03449___spmB-RBAM_021310___spmB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03449___spmB
# 2: RBAM_021310___spmB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 540
# Identity:     438/540 (81.1%)
# Similarity:   438/540 (81.1%)
# Gaps:           6/540 ( 1.1%)
# Score: 1784.0
# 
#
#=======================================

BSNT_03449___      1 ATGGAAATCATCAACTGGCTGTCTTTAGCCATGATTCCAATCATTATTGC     50
                     ||||||||..|.||.|||||||||||||||||||||||.||.|||||.||
RBAM_021310__      1 ATGGAAATGGTGAATTGGCTGTCTTTAGCCATGATTCCGATTATTATCGC     50

BSNT_03449___     51 CGGAATTCTTCTTTATGGAACGATCAAAAAGGTTCCGACATATGAATCGT    100
                     |||.||..|..|.||.||.|||||||||||.||.|||||.||||||||.|
RBAM_021310__     51 CGGTATATTGATATACGGCACGATCAAAAAAGTGCCGACGTATGAATCAT    100

BSNT_03449___    101 TTGTCGAAGGTGGGAAAGAGGGGATAGAAATTGCCTTTTCCATTATCCCC    150
                     |.||.|||||.||.|||||.||.||.||.|||||.||||||||.||.||.
RBAM_021310__    101 TCGTTGAAGGCGGAAAAGAAGGAATTGAGATTGCGTTTTCCATCATTCCG    150

BSNT_03449___    151 TATTTAGTCGGAATGCTTGTCGCTATAACTGTTTTCAGATCATCAGGCGC    200
                     |||||.|||||.|||||.||.||.||.||.||.|||.|..|.||.|||||
RBAM_021310__    151 TATTTGGTCGGGATGCTGGTGGCGATTACCGTATTCCGGGCCTCGGGCGC    200

BSNT_03449___    201 GCTTGATTTTATAATGGATCTTTTAAAACCGGCTTTCT---CCGCTATCG    247
                     |||.||||||.|.||||..||.|..||   |.||||||   |.||..|||
RBAM_021310__    201 GCTGGATTTTGTCATGGGGCTGTGCAA---GCCTTTCTTTACAGCGCTCG    247

BSNT_03449___    248 GCATTCCTGCTGAAGTAGTGCCGCTTGCTCTGATCCGCCCGATCTCCGGT    297
                     |||||||.||.|||||.||||||||||||||||||||||||||.||.||.
RBAM_021310__    248 GCATTCCCGCAGAAGTCGTGCCGCTTGCTCTGATCCGCCCGATTTCGGGG    297

BSNT_03449___    298 ACGGCCGCTCTCGGAATGACGACCGATTTAATTGCAGTATACGGGCCCGA    347
                     |||||.||.|||||.||||||||.|||.|.||.||.||.||||||||.||
RBAM_021310__    298 ACGGCGGCGCTCGGCATGACGACAGATCTGATCGCCGTGTACGGGCCTGA    347

BSNT_03449___    348 TTCCTTTATCGGCAGGCTGGCTTCCGTCATGCAGGGATCTACAGATACAA    397
                     |||.||||||||||||||||||||.||||||||||||||.||.||.||.|
RBAM_021310__    348 TTCATTTATCGGCAGGCTGGCTTCGGTCATGCAGGGATCGACTGACACGA    397

BSNT_03449___    398 CGCTTTACGTACTGACTGTGTATTTCGGAGCAGTCGGCATTAAAAAAATG    447
                     ||||.||.||.|||||.|||||||||||.||.||||||||.|||||||||
RBAM_021310__    398 CGCTGTATGTCCTGACGGTGTATTTCGGGGCGGTCGGCATCAAAAAAATG    447

BSNT_03449___    448 GGTGATGCATTAAAGGTGGGACTTCTTGCAGATTTAATCGGCGTAGTTGC    497
                     ||.|||||.||||||||.||.||||||||.|||||.|||||.||.|||||
RBAM_021310__    448 GGGGATGCTTTAAAGGTTGGTCTTCTTGCTGATTTGATCGGGGTGGTTGC    497

BSNT_03449___    498 ATCTATCATCATCGTTACGTTATTATTTGGGAGCGCCTGA    537
                     |||.||||||||.|||||||||||||||||.|||||||||
RBAM_021310__    498 ATCAATCATCATAGTTACGTTATTATTTGGAAGCGCCTGA    537


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