Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03496 and RBAM_021610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:44
# Commandline: needle
# -asequence dna-align/BSNT_03496___drm.1.9828.seq
# -bsequence dna-align/RBAM_021610___drm.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03496___drm-RBAM_021610___drm.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03496___drm-RBAM_021610___drm.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03496___drm
# 2: RBAM_021610___drm
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1196
# Identity: 963/1196 (80.5%)
# Similarity: 963/1196 (80.5%)
# Gaps: 19/1196 ( 1.6%)
# Score: 3903.5
#
#
#=======================================
BSNT_03496___ 1 ---ATGCCTGCATACAAATATAATCGTGTGTTTTTAATTGTGATGGACTC 47
|||.|||.||||||||||||.||.||.|||||.||.||.|||||.||
RBAM_021610__ 1 ATGATGTCTGAATACAAATATAACCGGGTATTTTTGATCGTAATGGATTC 50
BSNT_03496___ 48 AGTCGGAATCGGCGAAGCGCCGGATGCCGCTGACTTTAATGATGAAGGCG 97
.|||||||||||.|||||||||||.|||||.||.|||||||||..|||||
RBAM_021610__ 51 TGTCGGAATCGGTGAAGCGCCGGACGCCGCCGATTTTAATGATATAGGCG 100
BSNT_03496___ 98 CTCATACGCTCGGTCATATTGCCGAGCATATGAGCGGATTACATATGCCG 147
|..||||||||||.||.||.||.|||||.||||.|||.|||||||||||.
RBAM_021610__ 101 CAAATACGCTCGGACACATCGCAGAGCACATGAACGGCTTACATATGCCC 150
BSNT_03496___ 148 AATATGGCAAAGCTCGGCCTTGGTCTTATCGAAGATATCAAAGGTGTAGA 197
.||.||||..|||||||.||.||.||.||||.|||.||.||.||.||.||
RBAM_021610__ 151 CATTTGGCGCAGCTCGGTCTCGGACTGATCGGAGACATTAAGGGCGTGGA 200
BSNT_03496___ 198 AAAAACAGAACATCCGCTTGCCTACTATGGAAAAATACAAGAAGCGTCAA 247
||||||.||.||.||.|||||.|||||.||||||||.||.||.|||||||
RBAM_021610__ 201 AAAAACGGAGCACCCTCTTGCGTACTACGGAAAAATGCAGGAGGCGTCAA 250
BSNT_03496___ 248 ACGGAAAAGATACGATGACCGGCCATTGGGAGATTATGGGTTTATACATT 297
||||.||||||||||||||.||.||.||||||||||||||..|.||||||
RBAM_021610__ 251 ACGGGAAAGATACGATGACGGGGCACTGGGAGATTATGGGCCTCTACATT 300
BSNT_03496___ 298 GATAAACCATTTAAAGTGTTCCCGGAAGGCTTTCCTGATGAATTGCTTCA 347
||.|||||.||||||||||||||||||||.|||||.||||||.|.|||||
RBAM_021610__ 301 GAAAAACCGTTTAAAGTGTTCCCGGAAGGATTTCCGGATGAACTTCTTCA 350
BSNT_03496___ 348 AGAGCTGGAAAAGAGATCTGGCCGCAAAATTATTGGAAACAAGCCGGCTT 397
.||.||.||...|.|.||.||.||.|||||.||.|||||.||||||||||
RBAM_021610__ 351 GGAACTTGAGCGGCGTTCAGGACGGAAAATCATCGGAAATAAGCCGGCTT 400
BSNT_03496___ 398 CCGGCACAGCGATTTTGGATGAGCTTGGTCAGGAGCACATGGAGACAGGG 447
|.|||||.||||||.||||.|||||.||..|.||.||.|||||.||.||.
RBAM_021610__ 401 CAGGCACGGCGATTCTGGACGAGCTCGGAAAAGAACATATGGAAACGGGT 450
BSNT_03496___ 448 GCTTTAATTGTTTACACGTCTGCTGACTCTGTTCTGCAAATTGCCGCTCA 497
||..|.||.|||||.||.||.||.||.||.||.|||||.|||||.|||||
RBAM_021610__ 451 GCGCTGATCGTTTATACATCAGCAGATTCCGTGCTGCAGATTGCGGCTCA 500
BSNT_03496___ 498 CGAAGAGGTTGTGCCGCTTGAGGAGCTGTATCGCATTTGCGAAACGGCGA 547
||||||.||.||.||||||||.||.|||||..||||.||.||||||||.|
RBAM_021610__ 501 CGAAGATGTCGTTCCGCTTGACGAACTGTACAGCATCTGTGAAACGGCCA 550
BSNT_03496___ 548 GAGAGCTGACGCTTGATCCGAAATATATGGTTGGCCGCATTATTGCACGG 597
||||.||||||||||||||||||||.|||||.|||||.|||||.|||.|.
RBAM_021610__ 551 GAGAACTGACGCTTGATCCGAAATACATGGTCGGCCGGATTATCGCAAGA 600
BSNT_03496___ 598 CCGTTCGTCGGAGAGCCGGGTCA-ATTCAAACGGACGCCAAACCGCCATG 646
||||||||||||||.||||| || .||||||||.|||||.|||||.||||
RBAM_021610__ 601 CCGTTCGTCGGAGAACCGGG-CAGCTTCAAACGCACGCCGAACCGTCATG 649
BSNT_03496___ 647 ACTATGCCCTTAAACCGTTTGATCGCACTGTCATGAATGAATTGAAAGAC 696
|.|||||.||.||||||||.|..|||||.||.|||||.|.|.||||||||
RBAM_021610__ 650 ATTATGCGCTCAAACCGTTCGGCCGCACGGTAATGAACGGAATGAAAGAC 699
BSNT_03496___ 697 AGCGGCTTAGATGTGATTTCAATCGGTAAAATCTCTGATATTTACGACGG 746
|||||.|||||.||.|||||.|||||.|||||.|||||||||||.|||||
RBAM_021610__ 700 AGCGGATTAGACGTCATTTCTATCGGCAAAATTTCTGATATTTATGACGG 749
BSNT_03496___ 747 AGAAGGCATTACTTCTTCACGCAGAACGGTTTCTAATATGGACGGAATGG 796
||||||||||||.|||||.|||.|.|||||.||||||||||||||.||||
RBAM_021610__ 750 AGAAGGCATTACATCTTCCCGCCGCACGGTATCTAATATGGACGGCATGG 799
BSNT_03496___ 797 ACAAGGTGATCGATACGCTGGGAGAAGACTTTACGGGTCTGAGCTTTGCG 846
||||.|||||.||.|||||.||.|||||.||||||||.|||||||||||.
RBAM_021610__ 800 ACAAAGTGATTGAAACGCTCGGTGAAGAGTTTACGGGCCTGAGCTTTGCC 849
BSNT_03496___ 847 AACCTTGTTGATTTTGACGCGTTATTCGGACACCGCCGTGACCCTGAAGG 896
||.||.|||||||||||||||.|.|.||||||||||||.||.||.|||||
RBAM_021610__ 850 AATCTCGTTGATTTTGACGCGCTGTACGGACACCGCCGCGATCCGGAAGG 899
BSNT_03496___ 897 CTACGGACGCGCGCTTGAAGAATTTGATGCGCGGCTTCCGGAAGTGTTTG 946
.||||||...|||||.||.|||||.||.|||.||||||||||||||||||
RBAM_021610__ 900 GTACGGAAAAGCGCTCGAGGAATTCGACGCGAGGCTTCCGGAAGTGTTTG 949
BSNT_03496___ 947 AAAAAATGAGAGAAGACGATCTGTTAATTATTACAGCCGACCACGGCAAT 996
|.|||||||.|||||||||||||.|.||.||.||.||.||.|||||||||
RBAM_021610__ 950 AGAAAATGAAAGAAGACGATCTGCTTATCATCACTGCGGATCACGGCAAT 999
BSNT_03496___ 997 GATCCGATTCATCATGGGACTGACCATACACGCGAGTATGTGCCGATTCT 1046
|||||..|.|||||.||.||.||.||.||..|.||||||||||||.||||
RBAM_021610__ 1000 GATCCTGTCCATCACGGCACGGATCACACGAGGGAGTATGTGCCGCTTCT 1049
BSNT_03496___ 1047 CGCTTACAGCAAAAAACATAA-------GAAAGCGCAAATGCTGCCGCTT 1089
.|..|||||||||||.||.|| ||| || ||||||||||
RBAM_021610__ 1050 TGTGTACAGCAAAAAGCACAAACACACTGAA----CA---GCTGCCGCTT 1092
BSNT_03496___ 1090 GCAGATACATTTGCCGATATTGGCGCAACGATCGCTGATAATTTCCAAAC 1139
||.|||||||||||||||||.||||||||.||.||.|||||||||.||||
RBAM_021610__ 1093 GCGGATACATTTGCCGATATCGGCGCAACCATTGCGGATAATTTCAAAAC 1142
BSNT_03496___ 1140 AAATAAACCGAAATACGGGAAAAGCTTTTTATCTTTATTACAATAG 1185
..|.||.|||||||||||.||||||||||||||...||||||.|||
RBAM_021610__ 1143 GGAAAAGCCGAAATACGGAAAAAGCTTTTTATCAAGATTACAGTAG 1188
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