Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03498 and RBAM_021630

See Amino acid alignment / Visit BSNT_03498 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:44
# Commandline: needle
#    -asequence dna-align/BSNT_03498.1.9828.seq
#    -bsequence dna-align/RBAM_021630.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03498-RBAM_021630.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03498-RBAM_021630.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03498
# 2: RBAM_021630
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 228
# Identity:     194/228 (85.1%)
# Similarity:   194/228 (85.1%)
# Gaps:           0/228 ( 0.0%)
# Score: 834.0
# 
#
#=======================================

BSNT_03498         1 ATGGGAAGATTCCTGAAAACAGCTGTCGATGCATTGAAAGTTTTCATCCT     50
                     |||||.||||||||.||||||||.|..|||.|..|.|||||.||.||.||
RBAM_021630        1 ATGGGCAGATTCCTAAAAACAGCCGCGGATACGATCAAAGTGTTTATTCT     50

BSNT_03498        51 GTTTACCGGTTTTACCGCTTTGTTCTATTATGCTATGATATGGGTGAATC    100
                     |||.||.|||||||||||..|||||||||||||||||||||||||||||.
RBAM_021630       51 GTTCACAGGTTTTACCGCGCTGTTCTATTATGCTATGATATGGGTGAATT    100

BSNT_03498       101 AAGAGTATGAAAACTATCATCGGTATGATAAACCGGAAGGCTCCGCTGTA    150
                     .||||||||||||||||||||||||.||||||||||||||||||||.||.
RBAM_021630      101 CAGAGTATGAAAACTATCATCGGTACGATAAACCGGAAGGCTCCGCCGTC    150

BSNT_03498       151 AAAGTTGTTGAAATGGATCAGGATGAAAAAGGCGGATGGTTCGACCGGTT    200
                     |||||.|...|||.|||.||.||.||.||||.|||.|||||||.|||.||
RBAM_021630      151 AAAGTGGCCAAAACGGAACATGAGGAGAAAGACGGCTGGTTCGGCCGATT    200

BSNT_03498       201 GATCTTTTTTTACCAAAACGGGGAGTAG    228
                     ||||||||||||||||||||||||||||
RBAM_021630      201 GATCTTTTTTTACCAAAACGGGGAGTAG    228


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