Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03505 and RBAM_021680
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:45
# Commandline: needle
# -asequence dna-align/BSNT_03505___mleA.1.9828.seq
# -bsequence dna-align/RBAM_021680___mleA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03505___mleA-RBAM_021680___mleA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03505___mleA-RBAM_021680___mleA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03505___mleA
# 2: RBAM_021680___mleA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1326
# Identity: 1017/1326 (76.7%)
# Similarity: 1017/1326 (76.7%)
# Gaps: 18/1326 ( 1.4%)
# Score: 3836.0
#
#
#=======================================
BSNT_03505___ 1 ATGATAGCGAAACACATGATTCGGACACTGATGATCGAAACGCCTTCGGT 50
|||||..|.||.||.|||||||||||..|.|||||.||||||||..|.||
RBAM_021680__ 1 ATGATTACAAAGCATATGATTCGGACGTTAATGATTGAAACGCCGACTGT 50
BSNT_03505___ 51 TCCCGGAAATCTTGGAAGGGTGGCTACGGCAATCGGCCTTCTGGGCGGAG 100
||||||||||||.||||..|||||.||.||.|||||..|..|||||||||
RBAM_021680__ 51 TCCCGGAAATCTCGGAAAAGTGGCAACCGCCATCGGAGTGATGGGCGGAG 100
BSNT_03505___ 101 ATATTGGTGAAGTGGAGACGGTAAAGGTCGGACCCAATTACACAATGCGG 150
||||.||.|||||.||.||.||.||.|||||.||.||.|||||||||||.
RBAM_021680__ 101 ATATCGGGGAAGTTGAAACCGTTAAAGTCGGCCCGAACTACACAATGCGC 150
BSNT_03505___ 151 AATATTACCGTTCAAGTGGAGAATGAAGAACAGCTTCAGGAAGTGATCGC 200
||.|||||.||.||.|..||.||||||||.|||||.||||||.|.||...
RBAM_021680__ 151 AACATTACGGTGCAGGCCGAAAATGAAGAGCAGCTGCAGGAAATCATTCA 200
BSNT_03505___ 201 GGCTGTACAGGCCCTCGGAGAAGGGATCAGGCTTCACACCGTATCTGATG 250
.||..|..|.||.|||||.|||||.|||.|||||||.||.||.||.||||
RBAM_021680__ 201 AGCCATTGAAGCTCTCGGTGAAGGCATCCGGCTTCATACAGTCTCAGATG 250
BSNT_03505___ 251 AAGTCCTGTCCGCACATGAAGGCGGAAAAATCCAAATGAAAAGCAAAATG 300
||||.||.||.||.|||||||||||.|||||.||.|||||||||||||||
RBAM_021680__ 251 AAGTGCTCTCTGCTCATGAAGGCGGCAAAATTCAGATGAAAAGCAAAATG 300
BSNT_03505___ 301 CCGATCCGTTCACTGGCAGAGCTGGGACGTGTCTACACACCAGGTGTTGC 350
||||||||..|||||||.|||||.||.|||||.||.||.||.|||||.||
RBAM_021680__ 301 CCGATCCGGACACTGGCTGAGCTTGGGCGTGTTTATACGCCGGGTGTCGC 350
BSNT_03505___ 351 GGACGTGTGCCGACTGATCGAAAAAGAACCTGAAAAAGCTTCTATTTATA 400
.||.||||||.|||||||.|||||.||.|||||||||||.||.||.||||
RBAM_021680__ 351 CGATGTGTGCAGACTGATTGAAAACGAGCCTGAAAAAGCGTCCATCTATA 400
BSNT_03505___ 401 CAACGATCAGCAATTCTGTTGCAATTGTAACGGATGGAACTGCAATTTTA 450
|.||.||||||||||||||.||.|||||.||.||.|||||.||.|||.|.
RBAM_021680__ 401 CGACAATCAGCAATTCTGTCGCCATTGTCACCGACGGAACGGCGATTCTC 450
BSNT_03505___ 451 GGCCTTGGGAATATCGGCTCTGTGGCTGGCATGCCTGTCATGGAAGGAAA 500
|||||.||.||||||||||||||.||.||.|||||.||.||||||||.||
RBAM_021680__ 451 GGCCTCGGCAATATCGGCTCTGTCGCCGGAATGCCCGTAATGGAAGGGAA 500
BSNT_03505___ 501 GGCTGCTTTATTTGATCAGCTGGCGGGCATTAGCGGCATTCCGATACTGC 550
.||.||..|.|||||.|||||||||||.||.|||||.||||||||..|||
RBAM_021680__ 501 AGCCGCGCTTTTTGACCAGCTGGCGGGTATCAGCGGAATTCCGATTTTGC 550
BSNT_03505___ 551 TTGATACGAGTGATCCTGAAGAAATCATCAAAACAGTAAAACATATTTCT 600
|.|||||...||||||.|||||||||||....||.|||||||||||||||
RBAM_021680__ 551 TCGATACTTCTGATCCGGAAGAAATCATTCGCACGGTAAAACATATTTCT 600
BSNT_03505___ 601 CCGGGCTTTAGCGGCATCCTTCTTGAGGATATCGGTTCGCCGCATTGTTT 650
|||||.||.|||||.||.||.|||||.||||||||||||||.||.||.||
RBAM_021680__ 601 CCGGGGTTCAGCGGAATTCTGCTTGAAGATATCGGTTCGCCCCACTGCTT 650
BSNT_03505___ 651 TGAAATCGAGGATCGCCTAAAAGAGGAGCTGAACATCCCTGTTATGCACG 700
|||.||.||.||.|||||.|||||.||.|||.||||.||.||||||||||
RBAM_021680__ 651 TGACATTGAAGACCGCCTGAAAGAAGAACTGGACATTCCGGTTATGCACG 700
BSNT_03505___ 701 ATGACCAGCATGGTACAGCTGTAGTGACGCTGGCAGCTGCCATTTCGGCA 750
||||||||||.||.||.||.||.||.|||||.||.||.||||||||.||.
RBAM_021680__ 701 ATGACCAGCACGGCACGGCGGTCGTCACGCTCGCCGCCGCCATTTCCGCT 750
BSNT_03505___ 751 TGCAGGAGTGCGGGAGTTGACCTGAAAGAAGCGAAAGTGGGGCAAATCGG 800
||.|..||.||.||..||||..|.|||||||||||.||.||.||.|||||
RBAM_021680__ 751 TGTAAAAGCGCCGGTCTTGATTTAAAAGAAGCGAAGGTCGGTCAGATCGG 800
BSNT_03505___ 801 CCTTGGCGCAGCAGGCGTGGCCATCTGCCGGATGTTCATGGCTTATGGTG 850
.||.|||||.||||||||.|||||||||||.|||||.|||||.||.||.|
RBAM_021680__ 801 TCTCGGCGCGGCAGGCGTCGCCATCTGCCGCATGTTTATGGCATACGGAG 850
BSNT_03505___ 851 TGAATGCTGTGTACGGCACAGACAAATCAG-AGTCAGCAATGAACCGTCT 899
|.||.||.||.|.|||.||.|||||.|||| ||.| |||||||||||.||
RBAM_021680__ 851 TCAAAGCGGTCTGCGGAACGGACAAGTCAGAAGAC-GCAATGAACCGCCT 899
BSNT_03505___ 900 CGAACAATACGGCGGACAGGCAGTTTCCAGTATTGAGGAGCTTATGGAAA 949
||..||.|||||.||.|||.|..||...||.||..|.||..|.|||||.|
RBAM_021680__ 900 CGCTCAGTACGGAGGTCAGCCGCTTGGAAGCATCAAAGAATTAATGGACA 949
BSNT_03505___ 950 CATGTGATATTGTCAT-TGCTACAACGGGCGTTCCGGGT----TTAATAA 994
|.|||||.|||||.|| .|| ||.||.||.||||||||| |||| ||
RBAM_021680__ 950 CGTGTGACATTGTGATCAGC-ACCACAGGAGTTCCGGGTCTCATTAA-AA 997
BSNT_03505___ 995 AACCGGCATTTGTACGTTCTGGTCAAGTGATTCTGGCTTTATCGAATCCG 1044
||..|| .|||..|....||.||.||.||||||||||||||.||||||
RBAM_021680__ 998 AAGAGG---ATGTCAGAAAAGGACACGTCATTCTGGCTTTATCTAATCCG 1044
BSNT_03505___ 1045 AAGCCGGAAATTGAGCCGGAGGCCGCACTGCAGGCTGGCGCCGCATATGC 1094
||||||||.|||||.|||||.|..|||.|.||.||.||.|||||.|||||
RBAM_021680__ 1045 AAGCCGGAGATTGAACCGGAAGAGGCATTACAAGCCGGAGCCGCTTATGC 1094
BSNT_03505___ 1095 AGCTGACGGGCGTTCTGTTAATAATGTACTCGGTTTTCCGGGGATTTTTA 1144
|||||||||.|||||.||.||||||||.|||||.||.|||||||||||..
RBAM_021680__ 1095 AGCTGACGGCCGTTCGGTCAATAATGTTCTCGGCTTCCCGGGGATTTTCC 1144
BSNT_03505___ 1145 GAGGAGCGCTTAACGCAAAAAGCACGGAGATTAATCATGATATGCTTGTC 1194
|.||.|||||.|||||.|||||||.|.|.||..|.|||||.||||||||.
RBAM_021680__ 1145 GCGGCGCGCTGAACGCCAAAAGCAAGAAAATCGACCATGAAATGCTTGTG 1194
BSNT_03505___ 1195 GCAGCAGCAGAGGCCATCGCAGCTTGCACTAAACAAGGTGATGTTGTCCC 1244
||.||.|||||.||||||||..|||||||.|||||.||.|||.|.||.||
RBAM_021680__ 1195 GCGGCCGCAGAAGCCATCGCCTCTTGCACAAAACACGGCGATCTCGTGCC 1244
BSNT_03505___ 1245 TCAGCCGCTTGATTCAAAAGTCCATCATGCGGTAGCAGCAGCTGTCGAGC 1294
||||||..|.|||.|..|.||.|||||.||.|||.|||||||.||.||.|
RBAM_021680__ 1245 TCAGCCTTTGGATGCGGACGTGCATCAAGCCGTATCAGCAGCCGTAGAAC 1294
BSNT_03505___ 1295 ATGCAGCTCTTACAGCAGTGAAATAA 1320
..|| |.|.||||..||||||
RBAM_021680__ 1295 GGGC------TGCGGCAGGAAAATAA 1314
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