Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03605 and RBAM_022520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:53
# Commandline: needle
# -asequence dna-align/BSNT_03605___yqiG.1.9828.seq
# -bsequence dna-align/RBAM_022520___yqiG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03605___yqiG-RBAM_022520___yqiG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03605___yqiG-RBAM_022520___yqiG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03605___yqiG
# 2: RBAM_022520___yqiG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1182
# Identity: 839/1182 (71.0%)
# Similarity: 839/1182 (71.0%)
# Gaps: 93/1182 ( 7.9%)
# Score: 2912.5
#
#
#=======================================
BSNT_03605___ 1 GTGCGAATCCAAACGAAAGAAGATGAT----CAAATGAATCCTAAGTATA 46
||||| |||| || ||||
RBAM_022520__ 1 ----------------------ATGATGAAGCAAA------CT---TATA 19
BSNT_03605___ 47 AGCCACTTTTTGAACCATTTACGTTTAAAAGCGGCGTTACAATCGAC--A 94
|.||.||.||||||||.||||||||..||||||||||.||.|| || |
RBAM_022520__ 20 AACCGCTGTTTGAACCTTTTACGTTCGAAAGCGGCGTCACCAT--ACCAA 67
BSNT_03605___ 95 ACCGGATCGCAGTAGCACCGATGACTCATTACGCTTCTAATGAAGACGGT 144
||||.||..||||.|||||||||||.||.||..|.||.|||||.|||||.
RBAM_022520__ 68 ACCGTATTTCAGTCGCACCGATGACACACTATTCATCAAATGATGACGGA 117
BSNT_03605___ 145 ACAATATCTGAAGCG-GAGCTCGACTACATCATCCCCCGTTCAAAAGAGA 193
||.||.||.| |.|| ||..|...||||||.|..||||||||||||||.|
RBAM_022520__ 118 ACGATTTCCG-ACCGTGAATTAAGCTACATTACTCCCCGTTCAAAAGAAA 166
BSNT_03605___ 194 TGGGAATGGTGATTACAGCCTGCGCAAATGTTACACCGGACGGAAAAGCA 243
||||.|||||.|||||.||.||.|||||.||.||.||||||||.|||||.
RBAM_022520__ 167 TGGGCATGGTCATTACGGCATGTGCAAACGTAACGCCGGACGGCAAAGCG 216
BSNT_03605___ 244 TTCCCCGGGCAGCCGGCCATCCATGACGATTCCAACATTCCAGGTTTAAA 293
||.||.||.|||||.|.||||.||||.|||||..|||||||.||.||.||
RBAM_022520__ 217 TTTCCAGGCCAGCCCGGCATCTATGATGATTCTCACATTCCCGGCTTGAA 266
BSNT_03605___ 294 AAAGTTAGCACAAGCCATTCAGGCACAAGGCGCTAAAGCTGTTGTACAAA 343
|||..|.||.||.||.||.|||.|.|||||.||.|||||.|||||.||.|
RBAM_022520__ 267 AAAACTCGCTCAGGCGATCCAGTCTCAAGGAGCGAAAGCCGTTGTGCAGA 316
BSNT_03605___ 344 TTCATCACGGCGGTATT-GAGTGCCCGTCTGAGCTCGTTCC--TCAACAG 390
||||.|||||.|| ||| ||.|||||..||||.|||||.|| .||||
RBAM_022520__ 317 TTCACCACGGAGG-ATTGGAATGCCCTCCTGAACTCGTGCCAAACAAC-- 363
BSNT_03605___ 391 GATGTTGTGGGGCCAAGTGACGTGTTT-----GATAACGGCAAACAAATT 435
||.||.||..|.||.||.|.| | ||..||||.|.|||||..
RBAM_022520__ 364 GACGTCGTCAGTCCGAGCGGC-----TCAGAAGAAGACGGGAGACAAACG 408
BSNT_03605___ 436 GCTCGCGCATTAAAAGAAGAAGAAGTGGAAAACATTGTGAAGGCTTTTGG 485
.|.||.||..|.|..|||.|||||.|.||..||||.|||||.||.||.||
RBAM_022520__ 409 TCCCGGGCTCTCACCGAACAAGAAATTGAGCACATCGTGAAAGCATTCGG 458
BSNT_03605___ 486 AGAAGCGACAAGACGCGCCATTGAAGCCGGCTTTGACGGTGTCGAAATTC 535
.|||||||||.|..|.||.|||||||||||||||||||||||.|||||||
RBAM_022520__ 459 CGAAGCGACACGCAGAGCGATTGAAGCCGGCTTTGACGGTGTTGAAATTC 508
BSNT_03605___ 536 ACGGTGCAAACGGCTACTTAATTCAGCAGTTTTATTCTCCGAAAACCAAT 585
||||.||||||||.|||.|.|||||.||.||||||||.||||||||.||.
RBAM_022520__ 509 ACGGGGCAAACGGGTACCTGATTCACCAATTTTATTCACCGAAAACAAAC 558
BSNT_03605___ 586 CAGCGCACGGATCGCTGGGGAGGAAGCGATGAAAAACGATTAGCCTTCCC 635
|.||||||.||.||||||||.||||||||||||||.||..|.||.|||||
RBAM_022520__ 559 CGGCGCACAGACCGCTGGGGCGGAAGCGATGAAAAGCGCCTTGCGTTCCC 608
BSNT_03605___ 636 GCTCGCTATTGTCGATGAAGTGAAAAAAGC------------CGCTTCAG 673
|||.||..|.||.||.|..||.|||.|.|| |||| |
RBAM_022520__ 609 GCTTGCAGTCGTTGACGCTGTCAAACAGGCAATTGATACACACGCT---G 655
BSNT_03605___ 674 AACATGCGAAGGGTGCGTTCTTAGTCGGCTACCGTCTGTCTCCGGAAGAA 723
||.||.| .|.||||| ||||||||||.|||||.||||||||.
RBAM_022520__ 656 AAAATCC-----ATTCGTTC----TCGGCTACCGCCTGTCACCGGAAGAG 696
BSNT_03605___ 724 CCTGAGACACCGGGATTGACAATGACTGAAACTTATACGCTTGTTGATGC 773
||.||.||||||||..|.|||||||..|||||.|..|.|||.|.|||.||
RBAM_022520__ 697 CCGGAAACACCGGGGCTTACAATGAAAGAAACATTCATGCTCGCTGACGC 746
BSNT_03605___ 774 TTTAGGGGATAAAGAA-TTGGATTATCTTCATATCTCACTGATGGACGTG 822
..|.|.||| |.|||| |||||||||||.|||||.|||||||||||.||.
RBAM_022520__ 747 GCTTGCGGA-AGAGAACTTGGATTATCTGCATATTTCACTGATGGATGTC 795
BSNT_03605___ 823 AACTCAAAAGCGCGCCGCGGTGCAGATCCGACTCGCACACGCATGGACTT 872
||.||.|||||.||||||||.||.|||.|..|.||.||.||.|||||.||
RBAM_022520__ 796 AATTCCAAAGCCCGCCGCGGGGCGGATTCTTCACGGACCCGGATGGATTT 845
BSNT_03605___ 873 ATTGAATGAACGTGTCGGAAACAAAGTGCCGCTGATCGCCGTCGGTTCCA 922
|||.||.|||||.|||||..|.||||||||||||||.|||||||||||||
RBAM_022520__ 846 ATTAAACGAACGCGTCGGCCATAAAGTGCCGCTGATGGCCGTCGGTTCCA 895
BSNT_03605___ 923 TCCATTCCGCTGATGACGCGCTTGCCGTCATCGAAAACGGTATTCCGCTA 972
||.||.||||.||.||.||||||||.||..|.||||.|||.||||||||.
RBAM_022520__ 896 TCTATACCGCGGACGAAGCGCTTGCTGTATTAGAAAGCGGAATTCCGCTG 945
BSNT_03605___ 973 GTCGCTATGGGACGCGAAATTCTAGTTGACCCTGACTGGACGGTAAAAGT 1022
||.|||.|||||||.|..|||.|..||.||||.||.|||.||||....||
RBAM_022520__ 946 GTGGCTCTGGGACGTGTCATTTTGATTAACCCCGAATGGGCGGTGCTGGT 995
BSNT_03605___ 1023 AAAAGAAGGCCGTGAAAAGCAAATCGAAACAGTGA-TCAAAGGCA-CAGA 1070
.|||||||||||.|||.||.|||||||||.||..| |||| ||| |.||
RBAM_022520__ 996 CAAAGAAGGCCGCGAACAGGAAATCGAAAAAGCCATTCAA--GCATCTGA 1043
BSNT_03605___ 1071 TAAAGAAAAATATC-ATTTGCCTGAACCGCTATGGCAAGCAATTGTGA-- 1117
.|..||.|||||.| |.|| |||||||||.|||||.||...|||..||
RBAM_022520__ 1044 AATTGAGAAATACCGACTT-CCTGAACCGTTATGGGAAATGATTCAGAAT 1092
BSNT_03605___ 1118 ACACGCCAGGCTGGGTGCCTTATAAAGATTAA 1149
|||.|| |||||||||||.|.|.||.|.||.
RBAM_022520__ 1093 ACAGGC--GGCTGGGTGCCGTTTGAAAAGTAG 1122
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