Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03609 and RBAM_022550
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:53
# Commandline: needle
# -asequence dna-align/BSNT_03609___spo0A.1.9828.seq
# -bsequence dna-align/RBAM_022550___spo0A.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03609___spo0A-RBAM_022550___spo0A.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03609___spo0A-RBAM_022550___spo0A.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03609___spo0A
# 2: RBAM_022550___spo0A
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 804
# Identity: 690/804 (85.8%)
# Similarity: 690/804 (85.8%)
# Gaps: 3/804 ( 0.4%)
# Score: 2995.0
#
#
#=======================================
BSNT_03609___ 1 GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAG 50
||||||||||||||||||||||||||||||||||||||||||||.|||||
RBAM_022550__ 1 GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTTGTAAG 50
BSNT_03609___ 51 CCTGTTAAGTGAATATATAGAAGGACAGGAAGACATGGAAGTGATCGGCG 100
||||||.||||||||||||||.||||||||.||.||||||||||||||||
RBAM_022550__ 51 CCTGTTGAGTGAATATATAGAGGGACAGGATGATATGGAAGTGATCGGCG 100
BSNT_03609___ 101 TTGCTTATAACGGACAGGAATGCCTGTCGCTGTTTAAAGAAAAAGATCCC 150
||||||||||||||||||||||.||.||..||||||||||.||..||||.
RBAM_022550__ 101 TTGCTTATAACGGACAGGAATGTCTTTCTTTGTTTAAAGATAAGAATCCA 150
BSNT_03609___ 151 GATGTGCTCGTATTAGATATTATTATGCCGCATTTAGACGGACTTGCGGT 200
|||||||||||.|||||.|||||.|||||||||.|.||||||||||||||
RBAM_022550__ 151 GATGTGCTCGTTTTAGACATTATCATGCCGCATCTGGACGGACTTGCGGT 200
BSNT_03609___ 201 TTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCGAATGTCATTA 250
|||.|||.|.|||.||||||||||.||..|.||.||||||||.|||||.|
RBAM_022550__ 201 TTTGGAGCGTCTGCGGGAATCAGAGCTCGAGAAGCAGCCGAACGTCATCA 250
BSNT_03609___ 251 TGCTGACAGCCTTTGGGCAGGAAGATGTCACGAAAAAGGCCGTCGATTTA 300
|||||||.||.||.||.||||||||.||.||||||||.||||||||||||
RBAM_022550__ 251 TGCTGACGGCATTCGGTCAGGAAGACGTTACGAAAAAAGCCGTCGATTTA 300
BSNT_03609___ 301 GGCGCGTCCTACTTTATTCTCAAACCGTTTGATATGGAAAACCTTGTCGG 350
|||||||||||.||.||.||.||.||||||||||||||||||||||||||
RBAM_022550__ 301 GGCGCGTCCTATTTCATCCTGAAGCCGTTTGATATGGAAAACCTTGTCGG 350
BSNT_03609___ 351 TCATATCCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC 400
.||||||||||||||.||||||||||.|||||||||.||.||.|||||||
RBAM_022550__ 351 CCATATCCGCCAGGTAAGCGGAAATGTCAGCAGTGTCACACACCGTGCGC 400
BSNT_03609___ 401 CATCATCGCAAAGCAGTATTATACGCAGCAGCCAGCCTGAACCAAAGAAG 450
|.||..|||||||||||||||| |.||||||||||.|||||.|||..|
RBAM_022550__ 401 CGTCCGCGCAAAGCAGTATTAT---CCGCAGCCAGCCGGAACCGAAGCGG 447
BSNT_03609___ 451 AAAAATCTCGACGCGAGCATCACAAGCATTATCCATGAAATCGGCGTCCC 500
|||||||||||.||.|||||.|||||||||||||||||.|||||.||.||
RBAM_022550__ 448 AAAAATCTCGATGCCAGCATTACAAGCATTATCCATGAGATCGGTGTGCC 497
BSNT_03609___ 501 AGCCCATATTAAAGGCTATCTCTATCTGCGCGAAGCAATCTCAATGGTAT 550
.||||||||.|||||||||||.|||.||||.|||||.||.||.|||||.|
RBAM_022550__ 498 TGCCCATATCAAAGGCTATCTTTATTTGCGTGAAGCCATTTCCATGGTGT 547
BSNT_03609___ 551 ACAATGACATCGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGAC 600
|.||.||.||.|||.|.|||||||||||.|||||||||||.|||||.|||
RBAM_022550__ 548 ATAACGATATTGAACTCCTCGGCAGCATCACAAAAGTCCTTTATCCCGAC 597
BSNT_03609___ 601 ATCGCCAAAAAATTTAACACAACCGCAAGCCGTGTAGAAAGAGCGATCCG 650
||||||||||||||.|||||.||.|||||||||||||||.|.||.|||||
RBAM_022550__ 598 ATCGCCAAAAAATTCAACACGACTGCAAGCCGTGTAGAACGGGCCATCCG 647
BSNT_03609___ 651 TCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCT 700
.||.||.||||||||.|||||||||||.|||||.||||||||||||||.|
RBAM_022550__ 648 CCACGCCATTGAAGTCGCATGGAGCAGGGGAAATATTGATTCCATTTCTT 697
BSNT_03609___ 701 CGTTGTTTGGTTATACTGTCAGCATGACAAAAGCTAAACCTACCAACAGT 750
|..||||.||.|||||.||.||||||||||||||.||.||.||||||...
RBAM_022550__ 698 CACTGTTCGGATATACGGTAAGCATGACAAAAGCAAAGCCAACCAACTCG 747
BSNT_03609___ 751 GAATTCATTGCAATGGTTGCGGATAAGCTGAGGTTAGAGCATAAGGCTTC 800
||||||||.||.||||||||.||.||||||||.|||||||||||.|||||
RBAM_022550__ 748 GAATTCATCGCGATGGTTGCTGACAAGCTGAGATTAGAGCATAAAGCTTC 797
BSNT_03609___ 801 TTAA 804
.|||
RBAM_022550__ 798 GTAA 801
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