Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03616 and RBAM_022580
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:53
# Commandline: needle
# -asequence dna-align/BSNT_03616___ahrC.1.9828.seq
# -bsequence dna-align/RBAM_022580___ahrC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03616___ahrC-RBAM_022580___ahrC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03616___ahrC-RBAM_022580___ahrC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03616___ahrC
# 2: RBAM_022580___ahrC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 451
# Identity: 365/451 (80.9%)
# Similarity: 365/451 (80.9%)
# Gaps: 2/451 ( 0.4%)
# Score: 1469.0
#
#
#=======================================
BSNT_03616___ 1 ATGAACAAAGGCCAGAGGCATATTAAAATCAGAGAGATCATTACAAGCAA 50
||||..||||||||.||||||||.||||||||||||.|.|||||||||.|
RBAM_022580__ 1 ATGACAAAAGGCCAAAGGCATATAAAAATCAGAGAGCTTATTACAAGCCA 50
BSNT_03616___ 51 TGAAATCGAAACGCAGGATGAATTGGTCGACATGCTGA-AGCAGGATGGA 99
|||.||.||||||||||||||.||.||.|||||||||| || |.||.|||
RBAM_022580__ 51 TGAGATTGAAACGCAGGATGACTTAGTTGACATGCTGAGAG-AAGAAGGA 99
BSNT_03616___ 100 TACAAAGTAACGCAGGCCACGGTATCACGGGATATTAAAGAACTTCACCT 149
||.||.|||||.|||||.||.||.||..|.||.||||||||.||.||.||
RBAM_022580__ 100 TATAAGGTAACTCAGGCGACTGTCTCCAGAGACATTAAAGAGCTGCATCT 149
BSNT_03616___ 150 TGTAAAAGTGCCTACAAATAATGGTTCTTACAAATACAGTCTTCCGGCGG 199
.|||||.|||||.||.||.||.||.||.|||||||||||.||.|||||||
RBAM_022580__ 150 CGTAAAGGTGCCGACGAACAACGGCTCCTACAAATACAGCCTGCCGGCGG 199
BSNT_03616___ 200 ACCAGCGTTTCAATCCGCTGTCAAAGCTAAAGCGGGCATTGATGGACGCA 249
|.|||||.|||||||||||||||||.||.|||||..||||.|||||.||.
RBAM_022580__ 200 ATCAGCGGTTCAATCCGCTGTCAAAACTGAAGCGTTCATTAATGGATGCG 249
BSNT_03616___ 250 TTTGTGAAAATAGACTCAGCAAGCCATATGATTGTGCTGAAAACGATGCC 299
||.||.|||||.||||||||||||||||||||.||..|.|||||||||||
RBAM_022580__ 250 TTCGTAAAAATTGACTCAGCAAGCCATATGATCGTATTAAAAACGATGCC 299
BSNT_03616___ 300 GGGCAATGCCCAGGCAATCGGGGCGCTGATGGACAATTTGGACTGGGATG 349
|||.|||||.|||||||||||.||.||||||||.|||.|.||.|||||.|
RBAM_022580__ 300 GGGGAATGCTCAGGCAATCGGCGCTCTGATGGATAATCTCGAATGGGAAG 349
BSNT_03616___ 350 AAATGATGGGGACCATTTGCGGAGATGATACGATTTTAATTATTTGCCGG 399
||||.|||||.||.||||||||||||||.|||||.|||||.||.|||.|.
RBAM_022580__ 350 AAATCATGGGCACGATTTGCGGAGATGACACGATCTTAATCATCTGCAGA 399
BSNT_03616___ 400 ACTCCTGAAGATACAGAAGGCGTAAAAAACAGGCTCCTTGAACTGCTGTA 449
||.|||||||||||.||.|||||..|||.|.|.||..|.||.||||||||
RBAM_022580__ 400 ACGCCTGAAGATACGGAGGGCGTTCAAAGCCGTCTTTTGGAGCTGCTGTA 449
BSNT_03616___ 450 A 450
.
RBAM_022580__ 450 G 450
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