Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03627 and RBAM_022650
See
Amino acid alignment /
Visit
BSNT_03627 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:54
# Commandline: needle
# -asequence dna-align/BSNT_03627___nusB.1.9828.seq
# -bsequence dna-align/RBAM_022650___nusB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03627___nusB-RBAM_022650___nusB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03627___nusB-RBAM_022650___nusB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03627___nusB
# 2: RBAM_022650___nusB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 396
# Identity: 323/396 (81.6%)
# Similarity: 323/396 (81.6%)
# Gaps: 3/396 ( 0.8%)
# Score: 1324.0
#
#
#=======================================
BSNT_03627___ 1 ATGAAAAGAAGAACAGCAAGAGAAAAAGCTTTGCAGGCACTATTTCAAAT 50
|||||||||||||||||.|||||||||||||||||||||||.|||||.||
RBAM_022650__ 1 ATGAAAAGAAGAACAGCTAGAGAAAAAGCTTTGCAGGCACTTTTTCAGAT 50
BSNT_03627___ 51 TGATGTCAGCGATATTGCAGTGAATGAAGCCATAGAACACGCACTGGATG 100
|||||||||||||||||||..|||.||.|||||.||.|||||.||.||||
RBAM_022650__ 51 TGATGTCAGCGATATTGCACCGAACGATGCCATTGAGCACGCGCTTGATG 100
BSNT_03627___ 101 AAGAAAAAACAGATCCTTTCTTTGAACAGCTTGTACACGGGGTATTGGAA 150
..||||||||||||.|.||||||||||||||.||..||||.||..|.|||
RBAM_022650__ 101 GTGAAAAAACAGATGCCTTCTTTGAACAGCTGGTGTACGGAGTGATCGAA 150
BSNT_03627___ 151 CACCAAGACCAGCTGGATGAAATGATCTCCAAGCATCTGGTGAATTGGAA 200
||.||.|..|||||.|||||||||||.|||...|||||.||.||||||||
RBAM_022650__ 151 CATCAGGTTCAGCTTGATGAAATGATTTCCGGCCATCTCGTCAATTGGAA 200
BSNT_03627___ 201 GCTCGATCGGATTGCCAATGTTGACCGTGCGATTTTGCGCCTGGCAGCAT 250
|||.||.||||||||.||.||.|||||.|||||..||||.|||||.|..|
RBAM_022650__ 201 GCTTGACCGGATTGCAAACGTAGACCGCGCGATCCTGCGTCTGGCGGTGT 250
BSNT_03627___ 251 ATGAAATGGCATATGCCGAAGACATTCCGGTGAATGTCTCCATGAACGAA 300
|||||||||..|||.|.||.||||||||.|..||.||.||..|.||||||
RBAM_022650__ 251 ATGAAATGGTTTATTCTGACGACATTCCTGCTAACGTGTCATTAAACGAA 300
BSNT_03627___ 301 GCGATTGAGCTGGCAAAACGGTTTGGTGATGACAAAGCGACAAAGTTTGT 350
||.||.|||||||||||||||||.||.||.||.|||||..||||.||.||
RBAM_022650__ 301 GCAATCGAGCTGGCAAAACGGTTCGGCGACGATAAAGCTGCAAAATTCGT 350
BSNT_03627___ 351 AAACGGGGTTCTTTCTAACATTAAATCTGATATTGAACAATCATAG 396
|||||||||||||||||||||||||.|||||||.| ||||||||
RBAM_022650__ 351 AAACGGGGTTCTTTCTAACATTAAAACTGATATCG---AATCATAG 393
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.