Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03632 and RBAM_022670

See Amino acid alignment / Visit BSNT_03632 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:54
# Commandline: needle
#    -asequence dna-align/BSNT_03632___accC.1.9828.seq
#    -bsequence dna-align/RBAM_022670___accC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03632___accC-RBAM_022670___accC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03632___accC-RBAM_022670___accC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03632___accC
# 2: RBAM_022670___accC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1353
# Identity:    1138/1353 (84.1%)
# Similarity:  1138/1353 (84.1%)
# Gaps:           0/1353 ( 0.0%)
# Score: 4830.0
# 
#
#=======================================

BSNT_03632___      1 ATGATTAAAAAGCTATTGATCGCCAACAGAGGAGAAATTGCTGTCAGAAT     50
                     |||||||||||||||||||||||||||.||||||||||.||.||||||||
RBAM_022670__      1 ATGATTAAAAAGCTATTGATCGCCAACCGAGGAGAAATCGCCGTCAGAAT     50

BSNT_03632___     51 CATCAGAGCCTGCAGAGAGCTCGGAATTGAGACTGTCGCTGTTTATTCAG    100
                     ||||.|.|||||||.||||||.||.|||||.|||||.||.||||||||.|
RBAM_022670__     51 CATCCGGGCCTGCAAAGAGCTGGGCATTGAAACTGTAGCCGTTTATTCTG    100

BSNT_03632___    101 AAGCTGATAAAGATGCCCTTCATGTTCAAATGGCCGATGAAGCTTTTTGT    150
                     |.||.||||||||.|||||.|||||.||||||||||||||.|||||||||
RBAM_022670__    101 AGGCAGATAAAGACGCCCTGCATGTCCAAATGGCCGATGAGGCTTTTTGT    150

BSNT_03632___    151 ATCGGACCGAAAGCATCAAAAGACAGCTATTTAAACGTTACAAATATTGT    200
                     |||||.||||||.||||||||||.|||||||||||.||.||.||.||.||
RBAM_022670__    151 ATCGGGCCGAAAACATCAAAAGAAAGCTATTTAAATGTAACGAACATCGT    200

BSNT_03632___    201 GAGTGTTGCAAAGCTGACTGGCACGGACGCCATTCATCCGGGATACGGAT    250
                     .||.||.|||||||||||.||||||||.||.|||||||||||||||||||
RBAM_022670__    201 CAGCGTCGCAAAGCTGACCGGCACGGATGCGATTCATCCGGGATACGGAT    250

BSNT_03632___    251 TTTTAGCTGAAAATGCTGATTTCGCTGAATTATGTGAAGAAGTGAATGTC    300
                     |||||||||||||.||.||.||.||.||..|.||.||.|||.|.||.||.
RBAM_022670__    251 TTTTAGCTGAAAACGCCGACTTTGCCGAGCTGTGCGAGGAATTAAACGTA    300

BSNT_03632___    301 ACGTTTGTCGGCCCGAGCGCTGACGCCATTTCAAAAATGGGAACAAAAGA    350
                     ||||||||||||||.|..||||||||||||||||||||||||||||||||
RBAM_022670__    301 ACGTTTGTCGGCCCTACGGCTGACGCCATTTCAAAAATGGGAACAAAAGA    350

BSNT_03632___    351 CGTTGCGCGGGAAACGATGAAACAGGCCGGCGTGCCAATCGTACCGGGTT    400
                     ..|.|||||.||.||||||.|.|.|||.||||||||.||.||.||.||||
RBAM_022670__    351 TATCGCGCGCGACACGATGCAGCTGGCGGGCGTGCCGATTGTGCCCGGTT    400

BSNT_03632___    401 CACAGGGAATTATAGAAAATGTGGAAGAAGCGGTTTCGCTTGCTAATGAA    450
                     ||.|.|||||.|||.|||||..|||||||||||||||||||||...||||
RBAM_022670__    401 CAAAAGGAATCATAAAAAATACGGAAGAAGCGGTTTCGCTTGCAGGTGAA    450

BSNT_03632___    451 ATTGGGTATCCTGTAATTATAAAAGCCACCGCAGGCGGAGGCGGAAAAGG    500
                     ||||||||||||||.||||||||||||||.||.|||||||||||||||||
RBAM_022670__    451 ATTGGGTATCCTGTCATTATAAAAGCCACTGCGGGCGGAGGCGGAAAAGG    500

BSNT_03632___    501 AATTAGGGTTGCTCGCACTGAAGAGGAACTGATTAATGGCATTAAGATTA    550
                     .||..||||.||.|||||.|||||.||||||||.||.||||||.||||||
RBAM_022670__    501 CATCCGGGTCGCACGCACAGAAGAAGAACTGATCAAAGGCATTGAGATTA    550

BSNT_03632___    551 CACAGCAGGAAGCGGCAACTGCATTCGGAAATCCAGGTGTATACATCGAA    600
                     |.|||||||||||.||.||.||||||||||||||.|||||.||||||||.
RBAM_022670__    551 CCCAGCAGGAAGCCGCTACGGCATTCGGAAATCCGGGTGTGTACATCGAG    600

BSNT_03632___    601 AAATACATAGAAGATTTTCGCCACGTTGAGATCCAAGTGCTTGCTGATAA    650
                     ||.||||||||||||||.|||||.|||||.||.||.||||||||.|||||
RBAM_022670__    601 AAGTACATAGAAGATTTCCGCCATGTTGAAATTCAGGTGCTTGCGGATAA    650

BSNT_03632___    651 CTACGGAAATACGATCCATTTGGGCGAACGCGACTGCTCGATCCAAAGAC    700
                     .||||||||.|||||||||.|.||.||.||.|||||.||.||||||||||
RBAM_022670__    651 TTACGGAAACACGATCCATCTCGGAGAGCGTGACTGTTCTATCCAAAGAC    700

BSNT_03632___    701 GCCTGCAAAAGCTTTTGGAAGAATCACCATCTCCTGCCCTTGATTCAGAA    750
                     |.||||||||.|||.|.|||||.|||||.||.|||||.||||||||.|||
RBAM_022670__    701 GTCTGCAAAAACTTCTTGAAGAGTCACCGTCACCTGCGCTTGATTCTGAA    750

BSNT_03632___    751 ATCAGGGAGCAAATGGGAGATGCAGCGGTAAAGGCTGCAAAAGCGGTTGG    800
                     |||||||||||.|||||.||.|||||||||||.||.||.||.||.||.||
RBAM_022670__    751 ATCAGGGAGCAGATGGGTGAAGCAGCGGTAAAAGCAGCGAAGGCCGTCGG    800

BSNT_03632___    801 CTATACAGGTGCTGGAACAGTTGAATTTATCTATGACTACAATGAACAGC    850
                     .||.||.||.||.||.|||||.|||||.|||||||||||||..|||||||
RBAM_022670__    801 TTACACGGGAGCCGGCACAGTAGAATTCATCTATGACTACAGAGAACAGC    850

BSNT_03632___    851 GCTATTACTTCATGGAAATGAACACGAGAATTCAGGTAGAGCACCCAGTC    900
                     ||||.|||||||||||||||||||||.|.|||||.||||||||.||.|||
RBAM_022670__    851 GCTACTACTTCATGGAAATGAACACGCGTATTCAAGTAGAGCATCCTGTC    900

BSNT_03632___    901 ACAGAAATGGTGACGGGAACTGACCTGATCAAGGAACAAATCAAAGTGGC    950
                     ||||||||||||||||||||.||.||||||||.|||||.|||||||||||
RBAM_022670__    901 ACAGAAATGGTGACGGGAACGGATCTGATCAAAGAACAGATCAAAGTGGC    950

BSNT_03632___    951 ATCAGGAATGGAACTGAGCCTCAAGCAAGAGGATGTTGAATTTGAAGGCT   1000
                     |||.|||..|||.||....||||..||.||.||.|||||||||.|.||||
RBAM_022670__    951 ATCCGGACAGGAGCTTTCGCTCAGACAGGAAGACGTTGAATTTAACGGCT   1000

BSNT_03632___   1001 GGGCCATCGAATGCCGAATCAACGCAGAAAACCCAAGTAAAAATTTCATG   1050
                     ||||.||.||||||||.||||||||.|||||.||....|||||.||||||
RBAM_022670__   1001 GGGCGATTGAATGCCGCATCAACGCTGAAAATCCTGCGAAAAACTTCATG   1050

BSNT_03632___   1051 CCGTCACCTGGTGAAATTAAAATGTACCTGCCTCCTGGCGGTCTTGGTGT   1100
                     ||.|||||.|||.|||||||.|||||||||||.||.|||||.||.||.||
RBAM_022670__   1051 CCTTCACCCGGTAAAATTAACATGTACCTGCCGCCGGGCGGACTCGGCGT   1100

BSNT_03632___   1101 CCGTGTCGATTCAGCTGCGTACCCTGGCTATTCCATCCCACCGTACTATG   1150
                     .||.||.||||||||.||.||.||.||||||||.|||||.||||||||||
RBAM_022670__   1101 ACGCGTGGATTCAGCCGCATATCCCGGCTATTCGATCCCGCCGTACTATG   1150

BSNT_03632___   1151 ACAGCATGATTGCAAAGGTCATCACATACGGAAAAACGAGGGATGAAGCG   1200
                     ||||.||||||||.||.||||||||||||||||.||||.|.|||||.||.
RBAM_022670__   1151 ACAGTATGATTGCTAAAGTCATCACATACGGAACAACGCGTGATGAGGCA   1200

BSNT_03632___   1201 ATTGCCCGCATGAAGCGCGCATTGAGCGAATTCGTCATCGAAGGCATTGA   1250
                     .|.||.||.|||||.|||||..|||||||||||||.||.|||||.|||||
RBAM_022670__   1201 GTCGCACGGATGAAACGCGCGCTGAGCGAATTCGTGATTGAAGGTATTGA   1250

BSNT_03632___   1251 GACAACAATCCCTTTCCATTTAAAACTGCTTGAACACGAAACATTTGTGA   1300
                     .||.||.||.||.||||||||.||||||||||||||||||||||||||.|
RBAM_022670__   1251 AACGACGATTCCGTTCCATTTGAAACTGCTTGAACACGAAACATTTGTCA   1300

BSNT_03632___   1301 GCGGAGAGTTTAATACGAAATTTTTAGAAACATATGATGTAATGGGCTCA   1350
                     ||||||||||||||||.||.||||||||||||||||||||||||||||||
RBAM_022670__   1301 GCGGAGAGTTTAATACAAAGTTTTTAGAAACATATGATGTAATGGGCTCA   1350

BSNT_03632___   1351 TAA   1353
                     |||
RBAM_022670__   1351 TAA   1353


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