Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03641 and RBAM_022710
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:55
# Commandline: needle
# -asequence dna-align/BSNT_03641___spoIIIAF.1.9828.seq
# -bsequence dna-align/RBAM_022710___spoIIIAF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03641___spoIIIAF-RBAM_022710___spoIIIAF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03641___spoIIIAF-RBAM_022710___spoIIIAF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03641___spoIIIAF
# 2: RBAM_022710___spoIIIAF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 626
# Identity: 497/626 (79.4%)
# Similarity: 497/626 (79.4%)
# Gaps: 10/626 ( 1.6%)
# Score: 1966.0
#
#
#=======================================
BSNT_03641___ 1 ATGAGTTTTTTAACGGAATGGCTTACCACCATCGTGTTGTTTATCCTATT 50
|||||.||||||||.||||||||.||.|.|||..|.||.||||||.||||
RBAM_022710__ 1 ATGAGCTTTTTAACAGAATGGCTGACAAGCATTATTTTATTTATCTTATT 50
BSNT_03641___ 51 TGCAATTGTGATTGATATGCTGCTGCCGAGCTCCAGCATGCAAAAGTACG 100
.||.||.||.||.||.|||||||||||.||||||||.||||||||.||||
RBAM_022710__ 51 CGCCATCGTCATCGACATGCTGCTGCCCAGCTCCAGTATGCAAAAATACG 100
BSNT_03641___ 101 CAAAAATGGTAGTCAGCCTGCTATTGATTGTCGTCATGCTTACGCCGATT 150
||||.|||||.|||||||||||.||.||..|.||||||||.|..|||||.
RBAM_022710__ 101 CAAAGATGGTTGTCAGCCTGCTGTTAATCATTGTCATGCTCAACCCGATA 150
BSNT_03641___ 151 TTTAAACTTTTCAAGACAGACCCCGAAGTCATCTTTGAATACCTCACAAA 200
||.|||||||||||.||||||||.|||.|||||||.||.||..|.|||||
RBAM_022710__ 151 TTCAAACTTTTCAAAACAGACCCGGAAATCATCTTCGATTATTTGACAAA 200
BSNT_03641___ 201 AAACGGGCAGTCAGAGTCTGCCGACATAAAAAATCAAATCAATTCAAAAA 250
|.|.|.|||.||..|.||.||.||.||||||||||||||.||.|||.|||
RBAM_022710__ 201 ACAAGAGCAATCTCAATCCGCTGATATAAAAAATCAAATTAAATCAGAAA 250
BSNT_03641___ 251 AAATAGAAATACAAGCTTCCCAGCGCGCATATATTCTAGAAGAAATGGCT 300
|||.||||||||||||.||..|.|||||||||.||.||||||||||||||
RBAM_022710__ 251 AAAAAGAAATACAAGCATCAAACCGCGCATATGTTTTAGAAGAAATGGCT 300
BSNT_03641___ 301 GTCCAACTAAAAAAGAAAGCGGAGGAGAGATTCAGTCATGATGAATATAA 350
||||||||||||||||||||||||||||..|||||||||||.|||||.||
RBAM_022710__ 301 GTCCAACTAAAAAAGAAAGCGGAGGAGATGTTCAGTCATGACGAATACAA 350
BSNT_03641___ 351 AGTAGGCCGCATCAAACTCACGGCAGGAGAAAAGGTAGATTCAGAAGAGG 400
|.|||.|..||||...||.||.||.|.||||.||||...|||||||||.|
RBAM_022710__ 351 AATAGACGACATCCGCCTTACAGCGGAAGAACAGGTTCGTTCAGAAGAAG 400
BSNT_03641___ 401 ATATTAAAACAATCAGCGTGTATATGGCCCCGTCTTCTGAAAAAACGGTC 450
||.|.|||||.||||||||||||||||||||.||||||||||||||.||.
RBAM_022710__ 401 ATGTAAAAACGATCAGCGTGTATATGGCCCCATCTTCTGAAAAAACCGTG 450
BSNT_03641___ 451 CAAACGGTCGCGCCGGTCCACATTGATACAGATCATGC--ATACGTAACA 498
|||||.|||||.|||.||.||||....|||||.| || |||||.|.|.
RBAM_022710__ 451 CAAACCGTCGCACCGATCGACATCCGCACAGACC--GCAAATACGAACCG 498
BSNT_03641___ 499 AAAGAAGCAGCCGAACAAAAAGAAGCCAAACAGAT---ACAAACGCAGCT 545
.|||..||||||||..|||||||.|||..|.|.|| |.||| |.||
RBAM_022710__ 499 GAAGGCGCAGCCGACAAAAAAGAGGCCGCAGACATCAAAGAAA---AACT 545
BSNT_03641___ 546 CGCGGACATTTGGGAAATCGGAAGTGAGAAAATTACGGTTCATATGGAAG 595
.|||||.||.|||||||||||.||||||||||||||||||.|||||||||
RBAM_022710__ 546 TGCGGATATATGGGAAATCGGCAGTGAGAAAATTACGGTTTATATGGAAG 595
BSNT_03641___ 596 GCGGGGAGAGTGTCGGCAATGAATAA 621
|||||||||....||||.||||||||
RBAM_022710__ 596 GCGGGGAGAAAAACGGCCATGAATAA 621
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