Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03649 and RBAM_022770

See Amino acid alignment / Visit BSNT_03649 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:55
# Commandline: needle
#    -asequence dna-align/BSNT_03649___yqhV.1.9828.seq
#    -bsequence dna-align/RBAM_022770___yqhV.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03649___yqhV-RBAM_022770___yqhV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03649___yqhV-RBAM_022770___yqhV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03649___yqhV
# 2: RBAM_022770___yqhV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity:     221/282 (78.4%)
# Similarity:   221/282 (78.4%)
# Gaps:           0/282 ( 0.0%)
# Score: 861.0
# 
#
#=======================================

BSNT_03649___      1 ATGAAATTTTTACTTGGAAATATCAATTCTACTGTTTTAACAATGGCGGG     50
                     |||||||||||..||||....||||||||||||||||||||.|||||.||
RBAM_022770__      1 ATGAAATTTTTGTTTGGTTCAATCAATTCTACTGTTTTAACGATGGCCGG     50

BSNT_03649___     51 ATTACGAGTTTTATCCTCTATGATTGAGCTGACGGCAGCAATTGTCATGC    100
                     .|||||||||||.|||||..|.|||||..|..||||.||.|||.||||||
RBAM_022770__     51 TTTACGAGTTTTGTCCTCGCTCATTGAATTATCGGCCGCTATTATCATGC    100

BSNT_03649___    101 TTGTGACCAACGATGTCCGGAAGGCGGTTGTGGTTAACAGCATTCTCGCT    150
                     ||.||||.|||||..||.|.||.||||||||.||.||.||.|||.|.||.
RBAM_022770__    101 TTTTGACAAACGACATCAGAAAAGCGGTTGTAGTGAATAGTATTTTGGCA    150

BSNT_03649___    151 ATTGTCGGTCCGTTGATTTTTATCATTACAATGACTGTCGGAATCTACCA    200
                     ||.|||||.|||.||||.||||||||.||||||||..||||.||.||.||
RBAM_022770__    151 ATCGTCGGCCCGCTGATCTTTATCATCACAATGACGATCGGCATTTATCA    200

BSNT_03649___    201 AATTGCCGGGCAGCTTTCGTATGCAAAGCTGATTCTGATTTTTACGGGTG    250
                     .||||||||.|||||.||.||||||||..|.||..||||||||.||||.|
RBAM_022770__    201 GATTGCCGGACAGCTCTCATATGCAAAATTAATATTGATTTTTGCGGGAG    250

BSNT_03649___    251 TTGTCTTGATTTTGGCGGGTGTTCATAAATAA    282
                     |.||..||||||||||.|||||.||||||||.
RBAM_022770__    251 TGGTGCTGATTTTGGCCGGTGTGCATAAATAG    282


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