Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03655 and RBAM_022820

See Amino acid alignment / Visit BSNT_03655 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:56
# Commandline: needle
#    -asequence dna-align/BSNT_03655___yqhP.1.9828.seq
#    -bsequence dna-align/RBAM_022820___yqhP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03655___yqhP-RBAM_022820___yqhP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03655___yqhP-RBAM_022820___yqhP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03655___yqhP
# 2: RBAM_022820___yqhP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 403
# Identity:     317/403 (78.7%)
# Similarity:   317/403 (78.7%)
# Gaps:          14/403 ( 3.5%)
# Score: 1252.0
# 
#
#=======================================

BSNT_03655___      1 ATGAATCATCGTGTACAACCTATTATTGCTGTATTAATTGCGCTGGGAGC     50
                     |||||||||||||||||||||.||.||||||||||.||.|||||.||.||
RBAM_022820__      1 ATGAATCATCGTGTACAACCTTTTTTTGCTGTATTGATAGCGCTTGGCGC     50

BSNT_03655___     51 GTTCGGTTTCCTCTATGTGCTGGTAACCAATCCCGGAGAAATG---GCAA     97
                     .|||||||||.|.||||.|..|||||||||.|||||..|.|||   .|||
RBAM_022820__     51 ATTCGGTTTCATTTATGCGGCGGTAACCAACCCCGGGCAGATGATTTCAA    100

BSNT_03655___     98 AAATGGCGGTAACCGTCATCGTGGCAGGTATCATTATTTATTTTATTGTG    147
                     .|   |||.|.|||||.||..|.|||||.|||||||||||||||||.|||
RBAM_022820__    101 GA---GCGATCACCGTTATTATCGCAGGCATCATTATTTATTTTATCGTG    147

BSNT_03655___    148 AAATATGTAATGAATCG----AAATGCGGGCAGCGAAGGAGCAGCCTTCA    193
                     |.....||..||||.||    |    |.|||.|.||.|||.|.||.||||
RBAM_022820__    148 AGGACGGTCCTGAACCGCCGCA----CCGGCCGTGACGGAACCGCTTTCA    193

BSNT_03655___    194 AAAAAGCGGCGAAACAATCGCGGCGCCGGATGAAAGAACAAAAAGCAAAA    243
                     .|||||||||.|.|||||||||||.|||.|||||.||.||||||||.||.
RBAM_022820__    194 GAAAAGCGGCCAGACAATCGCGGCTCCGAATGAAGGAGCAAAAAGCGAAG    243

BSNT_03655___    244 CACCGCGCCGGACATAAGGGACGTGTCAGCCACCTGCGAAGCGTTCCGAG    293
                     ||||||||||||||.|..||.||.||||||||..||||.|||||.|||||
RBAM_022820__    244 CACCGCGCCGGACACAGAGGCCGGGTCAGCCATTTGCGGAGCGTGCCGAG    293

BSNT_03655___    294 CGCCAGCAAGCCTAAGCCGATGATTCTCAAGAAAAAAAGCCAGACTCAGC    343
                     |..|||||..||.||||||||||||||.|||||||||||||||||.||||
RBAM_022820__    294 CAGCAGCAGACCGAAGCCGATGATTCTTAAGAAAAAAAGCCAGACCCAGC    343

BSNT_03655___    344 TGACTGTTATAGAAGGGAAAAAAAATAAAAAGAAAAACAGGGCGCTTTTT    393
                     |.||.||.||||||||.|||||.|||||||||||||||||.|||||||||
RBAM_022820__    344 TTACCGTCATAGAAGGCAAAAAGAATAAAAAGAAAAACAGAGCGCTTTTT    393

BSNT_03655___    394 TAA    396
                     |||
RBAM_022820__    394 TAA    396


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