Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03662 and RBAM_022860

See Amino acid alignment / Visit BSNT_03662 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:56
# Commandline: needle
#    -asequence dna-align/BSNT_03662___yqhL.1.9828.seq
#    -bsequence dna-align/RBAM_022860___yqhL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03662___yqhL-RBAM_022860___yqhL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03662___yqhL-RBAM_022860___yqhL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03662___yqhL
# 2: RBAM_022860___yqhL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 381
# Identity:     320/381 (84.0%)
# Similarity:   320/381 (84.0%)
# Gaps:           0/381 ( 0.0%)
# Score: 1356.0
# 
#
#=======================================

BSNT_03662___      1 TTGTCTAATATGATCGTTTTGATTATTTTTGCTGCGTTTATCATCTATAT     50
                     ||||||||||||||.|.|||.||||||.||||.|||||||||.|.|||||
RBAM_022860__      1 TTGTCTAATATGATTGCTTTAATTATTGTTGCGGCGTTTATCGTTTATAT     50

BSNT_03662___     51 GATTGCTTCCTATGTCTATCAGCAGCGAATTATGAAAACACTTACCGAAG    100
                     |||.|..||.|||.|.||.||||||||..|.||||||||||||||.||||
RBAM_022860__     51 GATCGTGTCGTATTTTTACCAGCAGCGTTTAATGAAAACACTTACGGAAG    100

BSNT_03662___    101 AAGAATTCCGCGCGGGTTACCGCAAAGCGCAGCTTATTGATGTTCGTGAG    150
                     |.||||||||||||||.|||.|.|||||||||||.|||||.||.|||||.
RBAM_022860__    101 AGGAATTCCGCGCGGGCTACAGAAAAGCGCAGCTGATTGACGTCCGTGAA    150

BSNT_03662___    151 CCAAATGAGTTTGAGGGCGGACATATTTTAGGCGCCCGCAACATCCCGCT    200
                     ||.|||||.|||||.|||||.||||||.|.|||||.||||||||.|||||
RBAM_022860__    151 CCGAATGAATTTGAAGGCGGCCATATTCTCGGCGCGCGCAACATTCCGCT    200

BSNT_03662___    201 TTCCCAGCTGAAACAGAGAAAAAATGAGATCCGTACGGACAAGCCTGTTT    250
                     .||.||||||||||||.|.||||.|||.||||||.|.||.||.||.||||
RBAM_022860__    201 GTCACAGCTGAAACAGCGCAAAAGTGAAATCCGTCCTGATAAACCCGTTT    250

BSNT_03662___    251 ACCTGTACTGCCAAAACAGTGTCCGCAGCGGACGCGCGGCACAAACCCTG    300
                     |.||||||||||||||||.||||||||||||||||||||||||.||.||.
RBAM_022860__    251 ATCTGTACTGCCAAAACAATGTCCGCAGCGGACGCGCGGCACAGACGCTC    300

BSNT_03662___    301 CGCAAAAACGGCTGCACTGAGATTTACAACCTAAAAGGCGGCTTTAAAAA    350
                     ||||||.|||||||.|..||.|||||||||||.||||||||.||||||||
RBAM_022860__    301 CGCAAACACGGCTGTAAAGATATTTACAACCTGAAAGGCGGATTTAAAAA    350

BSNT_03662___    351 ATGGGGCGGAAAGATTAAAGCGAAGAAATAA    381
                     ||||||||||||.||||||||.||.||.|||
RBAM_022860__    351 ATGGGGCGGAAAAATTAAAGCAAAAAACTAA    381


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