Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03676 and RBAM_022980
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:58
# Commandline: needle
# -asequence dna-align/BSNT_03676.1.9828.seq
# -bsequence dna-align/RBAM_022980___yqzE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03676-RBAM_022980___yqzE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03676-RBAM_022980___yqzE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03676
# 2: RBAM_022980___yqzE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 180
# Identity: 143/180 (79.4%)
# Similarity: 143/180 (79.4%)
# Gaps: 0/180 ( 0.0%)
# Score: 567.0
#
#
#=======================================
BSNT_03676 1 GTGAAAACGAATGATTATGTTAAATATATGACGCAGCAATTTGTCAAATA 50
||||||||.|||||||||||.|||||||||||..|||||||.||.|||||
RBAM_022980__ 1 GTGAAAACAAATGATTATGTAAAATATATGACTGAGCAATTCGTTAAATA 50
BSNT_03676 51 TATAGATACTCCGAGAGATGAGCGAAAAGAACGAAAAGAGGTGCGGAAAG 100
|.|.|||||.||||.|.|.||.||.|.|||.||||||||.||||||||||
RBAM_022980__ 51 TTTCGATACGCCGAAACAGGAACGGAGAGAGCGAAAAGAAGTGCGGAAAG 100
BSNT_03676 101 AAACAAAAACGCCTGCTTCCCAGCAGTGGTTCGGTATTTTACCCTATGGC 150
|||..|||..|||.|||||.|||||.||||||||.||.||.||.|||.|.
RBAM_022980__ 101 AAAAGAAAGTGCCGGCTTCTCAGCACTGGTTCGGAATATTGCCGTATAGT 150
BSNT_03676 151 TTCCGGCTTTGGCTGAAACGGAAAAAATAA 180
||...|||.|||.||.|.||||||||||||
RBAM_022980__ 151 TTTAAGCTGTGGATGCAGCGGAAAAAATAA 180
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