Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03678 and RBAM_022990
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:58
# Commandline: needle
# -asequence dna-align/BSNT_03678___comGG.1.9828.seq
# -bsequence dna-align/RBAM_022990___comGG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03678___comGG-RBAM_022990___comGG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03678___comGG-RBAM_022990___comGG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03678___comGG
# 2: RBAM_022990___comGG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 427
# Identity: 245/427 (57.4%)
# Similarity: 245/427 (57.4%)
# Gaps: 101/427 (23.7%)
# Score: 596.0
#
#
#=======================================
BSNT_03678___ 1 ATGTATCGTACAA----GA-GGGTTTATTTATCCAGCTGTTCTTTTTGTG 45
|| |||||| || ||.|||||.|||||.||.|||||.|||||.
RBAM_022990__ 1 ----AT-GTACAAATCTGACGGTTTTATATATCCCGCGGTTCTGTTTGTT 45
BSNT_03678___ 46 TCAG-CGC--TTGTGCTGTTAATCGTGAACTTTGCTGCTGCTCAATATAT 92
||.| ||| ||.|.||..|.||| |.||.|.||.|..||.|.|..|
RBAM_022990__ 46 TCTGCCGCAGTTTTACTTGTCATC---AGCTATACTTCGTCTGATTTCA- 91
BSNT_03678___ 93 TTCACGCTGCATGTTTGAAAAGGAAA----CAAAA---------GAGTTA 129
||||.| ||||| |.| ||||| ||||..
RBAM_022990__ 92 -TCACCC---------GAAAA--ACATTTGCAAAAGAGGCCGGGGAGTAC 129
BSNT_03678___ 130 TACATAGGAGAGAATTTGCTTCAAAATGGGGTGCTTCTTTCGATTCGGCA 179
|..||.|||||||||.||||.|||||.||.|||||.||.||.|..||.||
RBAM_022990__ 130 TGGATCGGAGAGAATCTGCTCCAAAACGGCGTGCTGCTGTCAAGCCGCCA 179
BSNT_03678___ 180 TGTTCTAGAGGAACGGAAAGG-CCAGGAGGGTACGCAGCAATTTCCATAT 228
|.|...|.|||.|| .||||| |||....|||||.||||..|||||.|||
RBAM_022990__ 180 TATGACACAGGGAC-AAAAGGTCCAAACTGGTACACAGCGTTTTCCGTAT 228
BSNT_03678___ 229 GG-ACGGGTTTCTTATTACATTCA-------TGATACATCGATAAAAGAA 270
|| || .|||||||.|.||| ||| |||| |..||
RBAM_022990__ 229 GGCAC-CGTTTCTTTTCACA-TCACGGGGAGTGAT-CGCCG--------- 266
BSNT_03678___ 271 CAAAAAGAAA----TCAACTTAAGAGTGTCAACGGAGTCGGGAACA---- 312
.|||| |||..||| |||...||.|||.||||
RBAM_022990__ 267 -----GGAAACGGTTCAGGTTA-------CAATTCAGGCGGAAACAACGA 304
BSNT_03678___ 313 ---GAAAGA-AC----TGCACAGATCGTATTTGATCAAAAACAGAAAAAA 354
|||.|| || .||.||..|..|.||.|||||.| ||||.|||
RBAM_022990__ 305 CAGGAACGAGACGGGAGGCTCACCTTTTGTTCGATCAGA---AGAAGAAA 351
BSNT_03678___ 355 CTGCTGA---GATGGAC---AGAATAA 375
|.||||| .|||||| ||.||||
RBAM_022990__ 352 CAGCTGATTCAATGGACGGAAGTATAA 378
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