Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03681 and RBAM_023010
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:58
# Commandline: needle
# -asequence dna-align/BSNT_03681___comGE.1.9828.seq
# -bsequence dna-align/RBAM_023010___comGE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03681___comGE-RBAM_023010___comGE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03681___comGE-RBAM_023010___comGE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03681___comGE
# 2: RBAM_023010___comGE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 371
# Identity: 218/371 (58.8%)
# Similarity: 218/371 (58.8%)
# Gaps: 79/371 (21.3%)
# Score: 564.5
#
#
#=======================================
BSNT_03681___ 1 ATGTGGAGAGAAAATAAAGGTTTTTCTACAATAGAAACAATGTCTGC--- 47
|||...|..|.||||||.||.||.|||||.||.||||||.|.||.||
RBAM_023010__ 1 ATGCTAAACGGAAATAAGGGGTTCTCTACTATTGAAACACTATCAGCAAT 50
BSNT_03681___ 48 -GCTAAGTCTGTGGCTGTTTGTGCTGCTGACAGTC-----GTCC--CCTT 89
||.| |.||||||| |.||..|||| ||| .||| .||.
RBAM_023010__ 51 GGCCA----TTTGGCTGT---TCCTTATGAC-GTCTATCATTCCGGTCTG 92
BSNT_03681___ 90 GTGGGACAAGCTGATAGCTG--ATGAAAAAATGGCGGA--ATCACGAGAA 135
|..||.||.|||||.||.|| .||||||.| || |||.|.||.|
RBAM_023010__ 93 GACGGGCATGCTGACAGATGGTCTGAAAATA-----GAAGATCGCCAGGA 137
BSNT_03681___ 136 ATCGGCTATCAGATGATGAATGAGA---GCATTAGCAAATATGTCATGAG 182
|.|| ||.|||.|..| |.||| ..||.||||..|||.|.||||.
RBAM_023010__ 138 AGCG--TACCAGCTTCT---TCAGAAACATATCAGCACTTATATGATGAC 182
BSNT_03681___ 183 TGGTGAAGGAGCCG-CGTCAAAAACGATTACAAAGAACAATCATATCTAT 231
.|| .||..||||| |||| |..|..|
RBAM_023010__ 183 CGG-AAAAAAGCCGCCGTC------------------------TCCCGGT 207
BSNT_03681___ 232 GCAATGAAGTGGGAGGAGGAGGGCGAATATCAAAACGTATGTA----TCA 277
| ||||||||.|||||||.||.||.|||.|.||.||.|||| |.|
RBAM_023010__ 208 G---TGAAGTGGAAGGAGGATGGTGAGTATTACAAAGTGTGTACGGCTGA 254
BSNT_03681___ 278 AAGCCACAGCTTATAAAGAGAAATCATATTGCCTCAGCATCCTGCAGACA 327
||.|||| .|||.|||||| .|||||||||||.||..|.|||
RBAM_023010__ 255 ---CCGCAGC---GAAAAAGAAAT----GTGCCTCAGCATTCTCAAAACA 294
BSNT_03681___ 328 GAATGGCTATACGCTTCTTAA 348
||.|||||.||||||||||||
RBAM_023010__ 295 GACTGGCTTTACGCTTCTTAA 315
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