Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03702 and RBAM_023130

See Amino acid alignment / Visit BSNT_03702 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:59
# Commandline: needle
#    -asequence dna-align/BSNT_03702___yqgW.1.9828.seq
#    -bsequence dna-align/RBAM_023130___yqgW.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03702___yqgW-RBAM_023130___yqgW.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03702___yqgW-RBAM_023130___yqgW.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03702___yqgW
# 2: RBAM_023130___yqgW
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 174
# Identity:     136/174 (78.2%)
# Similarity:   136/174 (78.2%)
# Gaps:           0/174 ( 0.0%)
# Score: 528.0
# 
#
#=======================================

BSNT_03702___      1 ATGTTACTTGTCGTGATTTTCGGCCTTGTCGCTCTTTTCGCTTTATGGGG     50
                     |||||||||||.||.||.||||||||||||||..|.||.|||.|||..||
RBAM_023130__      1 ATGTTACTTGTTGTAATCTTCGGCCTTGTCGCATTATTAGCTGTATTAGG     50

BSNT_03702___     51 AGTCTTGCGTTCTGTTAGAAATAAAAATATACTCGGGTTTTTATTAGCCG    100
                     ||||.||||..||||.|||.|.|.||||||.||.||.|||||.|||||||
RBAM_023130__     51 AGTCCTGCGGGCTGTCAGACAGAGAAATATCCTGGGATTTTTGTTAGCCG    100

BSNT_03702___    101 GTGCCACCTTATTTGTCTTTGGATGGTTTACCGTGATGACCGTAATAAAC    150
                     ..|||||..|....||.|||||.|||||||||||.||||||||..|||.|
RBAM_023130__    101 CCGCCACGCTGGGCGTGTTTGGCTGGTTTACCGTAATGACCGTTGTAACC    150

BSNT_03702___    151 AGCGGGTATCCAACCGCACATTAA    174
                     |||||.|||||.||.|||||||||
RBAM_023130__    151 AGCGGCTATCCGACTGCACATTAA    174


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