Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03710 and RBAM_023170
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:00
# Commandline: needle
# -asequence dna-align/BSNT_03710___glcK.1.9828.seq
# -bsequence dna-align/RBAM_023170___glcK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03710___glcK-RBAM_023170___glcK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03710___glcK-RBAM_023170___glcK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03710___glcK
# 2: RBAM_023170___glcK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 981
# Identity: 731/981 (74.5%)
# Similarity: 731/981 (74.5%)
# Gaps: 33/981 ( 3.4%)
# Score: 2656.5
#
#
#=======================================
BSNT_03710___ 1 ATGGACGAGATATGGTTTGCGGGCATTGACCTGGGAGGAACGACGATTAA 50
|||||.||.|.||||||||||||.|||||.||.||.|||||.||.||.||
RBAM_023170__ 1 ATGGAAGATACATGGTTTGCGGGGATTGATCTTGGCGGAACAACCATCAA 50
BSNT_03710___ 51 ACTCGCTTTTATAAATCA-ATATGGCGAAATTCAGCATAAGTGGGAAGTT 99
.||.||.|||||.|| || .||.||.||||||||||||||.|||||||||
RBAM_023170__ 51 GCTGGCCTTTATCAA-CATGTACGGTGAAATTCAGCATAAATGGGAAGTT 99
BSNT_03710___ 100 CCGACTGATAAAACCGGCGACACGATTACTGTCACAATTGCAAAAACAAT 149
|||||.||||||.|.||..||||.|||||.|||||.||.||.|||.|..|
RBAM_023170__ 100 CCGACCGATAAATCAGGAAACACAATTACGGTCACGATCGCCAAAGCGCT 149
BSNT_03710___ 150 CGA-CAGCAAGCTGGATGAGCTGCAAAAACCGAAGCACATCATCAAATAC 198
.|| ||| ||||||||.||.|||.|.||.|||||.|..|||.|.||||..
RBAM_023170__ 150 TGACCAG-AAGCTGGAAGAACTGAACAAGCCGAAACGGATCGTAAAATGG 198
BSNT_03710___ 199 ATCGGAATGGGTGCGCCAGGCCCTGTAGATATGGCGGCAGGAGTTGTTTA 248
|||||||||||.|||||.||.||.||.||.||||||.|.||..|.||.||
RBAM_023170__ 199 ATCGGAATGGGAGCGCCCGGACCCGTGGAAATGGCGACGGGGATGGTCTA 248
BSNT_03710___ 249 TGAAACAGTAAATCTAGGGTGGAAAAATTATGCTTTAAAAAACCATCTGG 298
|||.||...||||.|.|||||||||||.|||.|..|.|||.|||||||.|
RBAM_023170__ 249 TGAGACGACAAATATGGGGTGGAAAAACTATCCGCTGAAAGACCATCTCG 298
BSNT_03710___ 299 AGACAGAAACCGGCATCCCAGCTGTTATAGAAAATGACGCGAATATTGCT 348
||.|.|||||.||.||..|.||.||.||.|||||.||.||.|||||.||.
RBAM_023170__ 299 AGGCGGAAACGGGTATTTCGGCCGTCATTGAAAACGATGCCAATATCGCG 348
BSNT_03710___ 349 GCGCTCGGGGAAATGTGGAAGGGAGCGGGTGATGGCGCAAAAGACGTCAT 398
||||||||.||||||||||||||.||.|||||.||.||.|||||.|||||
RBAM_023170__ 349 GCGCTCGGAGAAATGTGGAAGGGTGCAGGTGACGGGGCCAAAGATGTCAT 398
BSNT_03710___ 399 TCTCGTGACGCTTGGCACAGGAGTTGGCGGCGGCATCATTGCAAATGGTG 448
|.|.||||||||.||.||.|||||.|||||.||||||||.|..||.||.|
RBAM_023170__ 399 TTTAGTGACGCTCGGAACCGGAGTCGGCGGAGGCATCATCGTCAACGGAG 448
BSNT_03710___ 449 AAATTGTACATGGCATAAATGGCGCCGGCGGAGAAATCGGCCATATTTGC 498
||||.||.||.||.|.|||.||.|||||||||||||||||.|||||||||
RBAM_023170__ 449 AAATCGTTCACGGTAAAAACGGGGCCGGCGGAGAAATCGGTCATATTTGC 498
BSNT_03710___ 499 AGCATCCCTGAAGGCGGAGCGCCCTGCAACTGCGGAAAAACGGGCTGTAT 548
||.||.||.|||||.|||||.||.|||||||||||||||.|.|||||.||
RBAM_023170__ 499 AGTATTCCGGAAGGAGGAGCTCCGTGCAACTGCGGAAAATCCGGCTGCAT 548
BSNT_03710___ 549 CGAAACAATTGCGTCAGCAACCGGAATTGTAAGAATTGCAAAAGAAAAAA 598
||||||.||||||||.|||||.||.||.||..|.||.||.||||||||..
RBAM_023170__ 549 CGAAACGATTGCGTCCGCAACAGGCATCGTCCGCATCGCGAAAGAAAAGC 598
BSNT_03710___ 599 TAGCAAATGTTAAAAAGAT--GACACGT-----TTAAAAGCAACCGAACA 641
|.||...|||| | |||.|.| |||.|||....|||.|
RBAM_023170__ 599 TTGCGGCTGTT-------TCCGACTCTTCGCTCTTACAAGTGCGCGATC- 640
BSNT_03710___ 642 ATTGTCAGCGCGGGATGTGTTTGAAGCGGCGGGTGAAA----ATGATGAA 687
||.|.||.||.||.|||||.|||||||| .||| |.|||.|.
RBAM_023170__ 641 --TGACGGCACGTGACGTGTTCGAAGCGGC----TAAACAGCAGGATAAG 684
BSNT_03710___ 688 ATTGCCCTTGAGGTGGTTGATTATGTAGCCAAGCATCTTGGTTTGGTGCT 737
|..||.|||||.||.||.||||||||.||.||.|||.|.||..|.|||||
RBAM_023170__ 685 ACAGCGCTTGAAGTCGTCGATTATGTCGCAAAACATTTAGGCCTCGTGCT 734
BSNT_03710___ 738 CGGAAATTTGGCAAGCTCGCTTAATCCGTCCAAAATCGTTCTTGGCGGCG 787
|||||||.||||||||.|..|.||||||.|.||||||||.||.|||||.|
RBAM_023170__ 735 CGGAAATCTGGCAAGCGCCATGAATCCGACGAAAATCGTGCTCGGCGGAG 784
BSNT_03710___ 788 GCGTATCGAGAGCCGGAGAACTGCTGAGATCAAAAGTCGAGAAAACATTC 837
||||.||.|.|||.||.|||.|.|||.|.||||||||.||..|.||.|||
RBAM_023170__ 785 GCGTGTCTAAAGCGGGTGAAATCCTGCGGTCAAAAGTTGAAGAGACTTTC 834
BSNT_03710___ 838 CGCAAAT--GCGCGTTTCCGCGGGCAGCCCAAGCTGCTGATATTTCAATC 885
.|||| .||||||.|||||..|.||..||||.||.||||||||.||.
RBAM_023170__ 835 --AAAATCACCGCGTTCCCGCGTTCTGCGGAAGCAGCGGATATTTCGATT 882
BSNT_03710___ 886 GCAGCACTTGGAAATGATGCCGGCGTTATCGGAGGCGCTTGGATCGCTAA 935
||.||||||||||||||.|||||.||.|||||.||.||.|||||.||.||
RBAM_023170__ 883 GCGGCACTTGGAAATGACGCCGGAGTCATCGGCGGGGCGTGGATTGCCAA 932
BSNT_03710___ 936 AAATGAATGGCTGAAACATCAAAATTGTTAA 966
||||||||||||.|||||||||||.||.|.|
RBAM_023170__ 933 AAATGAATGGCTCAAACATCAAAACTGCTGA 963
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