Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03711 and RBAM_023180
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:00
# Commandline: needle
# -asequence dna-align/BSNT_03711___yqgQ.1.9828.seq
# -bsequence dna-align/RBAM_023180___yqgQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03711___yqgQ-RBAM_023180___yqgQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03711___yqgQ-RBAM_023180___yqgQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03711___yqgQ
# 2: RBAM_023180___yqgQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 224
# Identity: 153/224 (68.3%)
# Similarity: 153/224 (68.3%)
# Gaps: 34/224 (15.2%)
# Score: 505.0
#
#
#=======================================
BSNT_03711___ 1 ATGAATACATTTTATGATGTGCAGCAGCTGTTAAAAACGTTTGGCCACAT 50
||||||.||||||||||.||||||||||||||.||..|.||.||.||.||
RBAM_023180__ 1 ATGAATTCATTTTATGACGTGCAGCAGCTGTTTAAGTCATTCGGACATAT 50
BSNT_03711___ 51 TGTTTATTTTGGAGACAGA-GAGCTTGAAATTGAGTTTATGCTGGATGAA 99
.||||||||.||.|||||| .||| |||||||||.||||||...||||||
RBAM_023180__ 51 CGTTTATTTCGGTGACAGACAAGC-TGAAATTGACTTTATGAAAGATGAA 99
BSNT_03711___ 100 TTAAAGGAATTATACATG--AACCACATGATTGAAAAGGAGCA--GTGGG 145
|||||||||.|.|||.|| || ||.||||||||| |||.| .|||.
RBAM_023180__ 100 TTAAAGGAAATGTACTTGTCAA--ACGTGATTGAAA--GAGAATTATGGC 145
BSNT_03711___ 146 CCAGAGCGGCAGCTGTCCTTCGAAAAGAATTGGAACAAACAAAAAACGGA 195
..|.|||.||.|..||.||||..|.|||||.|| |.||||
RBAM_023180__ 146 AAAAAGCCGCCGGAGTTCTTCAGAGAGAATCGG-----------AGCGGA 184
BSNT_03711___ 196 AGAGATTTCTATAAAGGC---TAA 216
|| |||||| |||
RBAM_023180__ 185 -------TC---AAAGGCAGATAA 198
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