Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03716 and RBAM_023200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:00
# Commandline: needle
# -asequence dna-align/BSNT_03716___yqgO.1.9828.seq
# -bsequence dna-align/RBAM_023200___yqgO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03716___yqgO-RBAM_023200___yqgO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03716___yqgO-RBAM_023200___yqgO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03716___yqgO
# 2: RBAM_023200___yqgO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 182
# Identity: 134/182 (73.6%)
# Similarity: 134/182 (73.6%)
# Gaps: 16/182 ( 8.8%)
# Score: 486.5
#
#
#=======================================
BSNT_03716___ 1 ATGAAAAAACTTTTGATATATGC-CATT-TTCGCGGTTTCT------GCC 42
|||||||||.|.|||||.|| | |||| |.|||.||.||| |||
RBAM_023200__ 1 ATGAAAAAATTGTTGATCTA--CTCATTATGCGCCGTATCTGTTTTAGCC 48
BSNT_03716___ 43 GTCATGTTTTATCAAAATCGCTACCGTCTTATGAATACTGTACTCAGCCA 92
| ||||.|||||.|||||||||||.|||||.|..||.||||||||
RBAM_023200__ 49 G------TTTACCAAAACCGCTACCGTCTGATGAACAGCGTGCTCAGCCA 92
BSNT_03716___ 93 GCCAGGAATCAGGCGGTCTTTTATCCATTTGTTTTTAAGAATTCCATTTA 142
|||.||.|||||.|||||.||.||.|||||.|||||||.|||.||.||||
RBAM_023200__ 93 GCCGGGGATCAGACGGTCATTCATTCATTTCTTTTTAAAAATACCGTTTA 142
BSNT_03716___ 143 TCCGCAATAAGTTTATACAGCAAGCTTTCTAA 174
||.|.||.||.||.||.|||||.||.||.|||
RBAM_023200__ 143 TCAGAAACAAATTCATTCAGCAGGCATTTTAA 174
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