Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03739 and RBAM_023380
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:02
# Commandline: needle
# -asequence dna-align/BSNT_03739___ispG.1.9828.seq
# -bsequence dna-align/RBAM_023380___ispG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03739___ispG-RBAM_023380___ispG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03739___ispG-RBAM_023380___ispG.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03739___ispG
# 2: RBAM_023380___ispG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1129
# Identity: 932/1129 (82.6%)
# Similarity: 932/1129 (82.6%)
# Gaps: 2/1129 ( 0.2%)
# Score: 3860.0
#
#
#=======================================
BSNT_03739___ 1 GTGAGTGAAATCACACATCGTACAAAAACGCGTCCCGTCAAAGTGGGACC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_023380__ 1 GTGAGTGAAATCACACATCGTACAAAAACGCGTCCCGTCAAAGTGGGACC 50
BSNT_03739___ 51 TTTAACAATAGGCGGCAACAATGAAGTTGTCATCCAAAGCATGACAACAA 100
|||||||||||||||.||.||.|||||.|||||.||.||.|||||.||.|
RBAM_023380__ 51 TTTAACAATAGGCGGAAATAACGAAGTCGTCATTCAGAGTATGACGACGA 100
BSNT_03739___ 101 CAAAAACACATGATGTAGAAGCAACGGTTGCGGAAATTAACCGTTTGGCT 150
|.||||||||.||.|||||||||||.|||||||||||.||||||||.||.
RBAM_023380__ 101 CCAAAACACACGACGTAGAAGCAACAGTTGCGGAAATCAACCGTTTAGCC 150
BSNT_03739___ 151 GAAGCCGGTTGCCAAATCGTTCGGGTAGCATGTCCGGATGAACGGGCAGC 200
||||||||.||||||||.||.|||||.|||||||||||.|||||.||.||
RBAM_023380__ 151 GAAGCCGGCTGCCAAATTGTCCGGGTGGCATGTCCGGACGAACGCGCCGC 200
BSNT_03739___ 201 AAACGCCATTGCGGATATTAAAAAGCGCATTTCCATTCCTCTTGTTGTTG 250
.|||||.|||||.||.||.|||||.|..||||||||.|||||.|||||.|
RBAM_023380__ 201 TAACGCGATTGCCGACATCAAAAAACAAATTTCCATCCCTCTCGTTGTCG 250
BSNT_03739___ 251 ACATACATTTCGATTATAAACTTGCGTTGAAAGCCATTGAAGGCGGCGCA 300
|.||.|||||.||.||.||.|||||.||.|||||.|||||.|||||.||.
RBAM_023380__ 251 ATATTCATTTTGACTACAAGCTTGCATTAAAAGCAATTGAGGGCGGGGCC 300
BSNT_03739___ 301 GATAAAATCCGCATCAACCCCGGCAACATCGGTCGACGTGAAAAAGTTGA 350
||.||||||.|.||||||||.||.||||||||.||.||.||||||||.||
RBAM_023380__ 301 GACAAAATCAGAATCAACCCGGGAAACATCGGCCGCCGCGAAAAAGTGGA 350
BSNT_03739___ 351 AGCGGTTGTTAAAGCGGCCAAAGACAAAGGCATTCCGATCAGGATCGGAG 400
|||.||.||.|||||.||.|||||.|||||.|||||.|||.|||||||.|
RBAM_023380__ 351 AGCCGTCGTAAAAGCAGCGAAAGAAAAAGGAATTCCAATCCGGATCGGCG 400
BSNT_03739___ 401 TAAACGCCGGTTCATTGGAAAAACGCATTTTAGAAAAATACGGTTATCCG 450
|||||||.|||||.|||||||||||||||||||||||||||||.||||||
RBAM_023380__ 401 TAAACGCGGGTTCTTTGGAAAAACGCATTTTAGAAAAATACGGCTATCCG 450
BSNT_03739___ 451 ACTGCCGATGGAATGGTAGAAAGCGCACTTCATCACATTAAAATTCTTGA 500
|||||.||.||||||||.||.||.||.||||||||.||.|||||.||.||
RBAM_023380__ 451 ACTGCTGACGGAATGGTTGAGAGTGCGCTTCATCATATCAAAATCCTGGA 500
BSNT_03739___ 501 GGATCTTGATTTTCACGATATTATTGTCAGCATGAAGGCCTCTGACGTGA 550
.||.|||||.||||||||.||.||.|||||||||||.||.||||||||.|
RBAM_023380__ 501 AGACCTTGACTTTCACGACATCATCGTCAGCATGAAAGCGTCTGACGTCA 550
BSNT_03739___ 551 ACCTTGCAATCGAGGCTTATGAAAAAGCGGCGAAAGCGTTTGACTACCCG 600
|.||.||.||.||.||.||.||||||||..|.|||||.|||||.||.|||
RBAM_023380__ 551 ATCTAGCCATAGAAGCATACGAAAAAGCTTCAAAAGCATTTGATTATCCG 600
BSNT_03739___ 601 CTTCACCTCGGGATCACCGAGTCAGGAACGCTGTTTGCCGGCACAGTAAA 650
||.||||||||.||.||.||.||.||.||||||||||||||.||.|||||
RBAM_023380__ 601 CTCCACCTCGGAATTACAGAATCGGGCACGCTGTTTGCCGGAACGGTAAA 650
BSNT_03739___ 651 GAGCGCAGCAGGACTCGGCGCCATTTTAAGCAAAGGCATCGGGAACACCA 700
.|||||.||.||||||||.||.||||||||||||||.|||||.|||||..
RBAM_023380__ 651 AAGCGCGGCCGGACTCGGAGCGATTTTAAGCAAAGGAATCGGAAACACGC 700
BSNT_03739___ 701 TGCGCATTTCACTAAGCGCAGACCCTGTAGAAGAGGTAAAAGTAGCAAGG 750
|.||.||.||.||.|||||.|||||.||.|||||.|||||||||||.||.
RBAM_023380__ 701 TCCGGATCTCTCTGAGCGCCGACCCGGTTGAAGAAGTAAAAGTAGCCAGA 750
BSNT_03739___ 751 GAGCTTCTGAAATCTTTCGG-CTTAGCCTCCAATGCTGCCACGCTCATCT 799
||.||.||||||||.||||| ||| ||.||.||.||.||.|||||.||.|
RBAM_023380__ 751 GAACTGCTGAAATCATTCGGTCTT-GCTTCAAACGCGGCTACGCTTATTT 799
BSNT_03739___ 800 CATGTCCGACTTGCGGCCGTATTGAGATTGATCTAATCAGCATTGCCAAT 849
||||.|||||.|||||.||.||.||.||||||||.||||||||.||.|||
RBAM_023380__ 800 CATGCCCGACATGCGGACGGATCGAAATTGATCTCATCAGCATCGCAAAT 849
BSNT_03739___ 850 GAAGTGGAAGAGTATATTTCTAAGATAAAAGCGCCGATTAAAGTTGCTGT 899
|||||||||||.||.||||||||..|.|||||||||||||||||.||.||
RBAM_023380__ 850 GAAGTGGAAGAATACATTTCTAAAGTCAAAGCGCCGATTAAAGTAGCGGT 899
BSNT_03739___ 900 TCTCGGCTGCGCTGTAAACGGACCTGGTGAAGCGAGAGAAGCTGATATCG 949
||||||.||.||.||.||||||||.||.|||||.||||||||||||||||
RBAM_023380__ 900 TCTCGGATGTGCCGTTAACGGACCGGGCGAAGCAAGAGAAGCTGATATCG 949
BSNT_03739___ 950 GAATCGCCGGTGCACGCGGTGAAGGTCTGCTGTTCCGGAAAGGGAAAATT 999
|.||.|||||.||.|||||.|||||.||.||.|||||.|||||..||||.
RBAM_023380__ 950 GGATTGCCGGCGCGCGCGGCGAAGGACTTCTTTTCCGCAAAGGCCAAATC 999
BSNT_03739___ 1000 GTCCGTAAGGTTCCAGAGGAAACGATGGTAGAAGAACTCAAAAAAGAAAT 1049
|||||.||.||.||.||.|||||.|||||.|||||.||.|||||||||||
RBAM_023380__ 1000 GTCCGCAAAGTCCCTGAAGAAACCATGGTCGAAGAGCTGAAAAAAGAAAT 1049
BSNT_03739___ 1050 TGACATTCTTGCTGAGGAACACTACGCAAAACTTGAAGCTGAAAAAGCAA 1099
.||||..||.||.||.||||||||||||||.||||||||.||||||||||
RBAM_023380__ 1050 CGACAAGCTGGCAGAAGAACACTACGCAAAGCTTGAAGCGGAAAAAGCAA 1099
BSNT_03739___ 1100 AATTAAAAGAAGAAACACAAAAAGCTTGA 1128
||..|.||.||||||||||||||||||||
RBAM_023380__ 1100 AAGCAGAACAAGAAACACAAAAAGCTTGA 1128
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