Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03751 and RBAM_023470
See
Amino acid alignment /
Visit
BSNT_03751 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:02
# Commandline: needle
# -asequence dna-align/BSNT_03751___ispH.1.9828.seq
# -bsequence dna-align/RBAM_023470___ispH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03751___ispH-RBAM_023470___ispH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03751___ispH-RBAM_023470___ispH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03751___ispH
# 2: RBAM_023470___ispH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 946
# Identity: 761/946 (80.4%)
# Similarity: 761/946 (80.4%)
# Gaps: 2/946 ( 0.2%)
# Score: 3053.0
#
#
#=======================================
BSNT_03751___ 1 ATGGACGTAATTAAAATTTCACCGCGCGGCTATTGCTATGGTGTTGTTGA 50
.|||||||.||.|||||.||.|||||||||||.||.||.||.||||||||
RBAM_023470__ 1 TTGGACGTTATCAAAATATCGCCGCGCGGCTACTGTTACGGCGTTGTTGA 50
BSNT_03751___ 51 TGCTATGGTCATTGCCAAAAATGCGTCACTAGATAAAAGCTTGCCAAGAC 100
|||.||||||||.||||||||.||||||||.|||||||...|||||||||
RBAM_023470__ 51 TGCCATGGTCATAGCCAAAAACGCGTCACTCGATAAAACACTGCCAAGAC 100
BSNT_03751___ 101 CCATCTATATACTCGGGATGATTGTTCATAATAAACACGTCACTGATGCG 150
|.||.|||||||||||.|||||||||||||||||.||.|||||.||||||
RBAM_023470__ 101 CTATATATATACTCGGAATGATTGTTCATAATAAGCATGTCACAGATGCG 150
BSNT_03751___ 151 TTTGAAGAGGAAGGGATTTTTACATTGGACGGCTCTAACCGTCTGGACAT 200
|||||.||.||.||.||||..||..|.||||||.|.|||||||||||.||
RBAM_023470__ 151 TTTGAGGAAGACGGCATTTACACGCTTGACGGCACAAACCGTCTGGAGAT 200
BSNT_03751___ 201 CTTAAAGCAGGTTGACAAAGGAACTGTCATTTTCACTGCGCACGGTGTTT 250
.|||||||||||.||.||||||||.||.||||||||.||.|||||.||.|
RBAM_023470__ 201 TTTAAAGCAGGTGGAAAAAGGAACCGTTATTTTCACGGCTCACGGGGTAT 250
BSNT_03751___ 251 CTCCCGAAGTCAGAAGAATCGCAGAAGAAAAAGGGTTAGTCGCAATTGAT 300
||||.|||||.||||.|..|||.||.|||||||||.|.||..|.|||||.
RBAM_023470__ 251 CTCCGGAAGTAAGAAAAGCCGCTGAGGAAAAAGGGCTTGTTACGATTGAC 300
BSNT_03751___ 301 GCTACATGTCCGGATGTGACGAAAACTCATAATCTAATCTTAGAGATGAA 350
||.|||||.|||||.||.||||||||.|||.|..|||||..|.|..|.||
RBAM_023470__ 301 GCCACATGCCCGGACGTCACGAAAACACATGACTTAATCCGAAAAGTAAA 350
BSNT_03751___ 351 AGAAAAAGGATATCACGTGATCTATATCGGCAAAAAAGGGCATCCAGAGC 400
||...||||.||||||||.||.||.|||||.||||||||.||.||.||||
RBAM_023470__ 351 AGCTGAAGGCTATCACGTCATATACATCGGTAAAAAAGGCCACCCCGAGC 400
BSNT_03751___ 401 CTGAGGGAGCCGTTGGCGTAGCGCCGGAGATCGTTCACTTAGTCGAAACA 450
||||.||||||||.|||||.||.||.||.||||||||..|.||.||||||
RBAM_023470__ 401 CTGAAGGAGCCGTCGGCGTCGCTCCTGAAATCGTTCATCTCGTTGAAACA 450
BSNT_03751___ 451 GAAGAAGATGTAAAGAACCTTGATATCCAAGCAGAGAAGTTAATCGTGAC 500
||.|||||.||.|..||.||.|||||.||.||.|||||.||||||||.||
RBAM_023470__ 451 GAGGAAGACGTGAGAAATCTCGATATTCAGGCTGAGAAATTAATCGTTAC 500
BSNT_03751___ 501 GAATCAAACAACAATGTCTCAATGGGATGTTCACGACATTATGGAGCTTG 550
.||.|||||.||||||||.||.|||||.||.|||||.||||||||....|
RBAM_023470__ 501 AAACCAAACGACAATGTCCCAGTGGGACGTCCACGATATTATGGAATCAG 550
BSNT_03751___ 551 TCAAAGAAAAATATCCTCATGTCGAATATCACCAAGAGATTTGCCTCGCT 600
||||||||||.||.||..|.||.|||||.||.||.||.||.|||||.||.
RBAM_023470__ 551 TCAAAGAAAAGTACCCGTACGTGGAATACCATCAGGAAATCTGCCTGGCC 600
BSNT_03751___ 601 ACTCAAGTGCGGCAGGAAGCTGTATCAGAGCAGGCAAAAAAAGCGGACTT 650
||.||.||.||.||.|||||||||||||||||||||||||||||||||||
RBAM_023470__ 601 ACACAGGTTCGTCAAGAAGCTGTATCAGAGCAGGCAAAAAAAGCGGACTT 650
BSNT_03751___ 651 AACAATCGTTGTCGGAGACCCGAAAAGCAACAATTCAAATAGGCTTGCTC 700
|||.||.||||||||.||.|||||||||||.||.||.||.||.||.||.|
RBAM_023470__ 651 AACCATTGTTGTCGGTGATCCGAAAAGCAATAACTCCAACAGACTGGCAC 700
BSNT_03751___ 701 AAGTGTCAGAGGAAATAGCCGGGACAAAAGCATACCGGATCGGCGACTTA 750
||||||||||.|||||.|||||.||||||||.|||||.|||||.|||.|.
RBAM_023470__ 701 AAGTGTCAGAAGAAATCGCCGGAACAAAAGCCTACCGAATCGGAGACATC 750
BSNT_03751___ 751 AGCGAATTGAAGCTCGAATGGCTGAAAGGCGTTAATACCGTTGCAGTTAC 800
||.|||.|||||||||||||||||||||.|||.||||||||.||.|||||
RBAM_023470__ 751 AGTGAACTGAAGCTCGAATGGCTGAAAGACGTCAATACCGTCGCCGTTAC 800
BSNT_03751___ 801 AGCGGGAGCTTCAACACCGACGCCGATCACAAAAGAAGTCATTCGCTTTT 850
.||.||.||.|||||||||||.|||||.|||||.||||||||.|||||||
RBAM_023470__ 801 CGCAGGCGCATCAACACCGACACCGATTACAAAGGAAGTCATCCGCTTTT 850
BSNT_03751___ 851 TAGAGCAGTTTGATCACGAAGATCCATCAACTTGGACAAC-TGAACATAA 899
|||||||||||||.|||.|.|||..|||.||.||| ||.| ||||||.|.
RBAM_023470__ 851 TAGAGCAGTTTGACCACAACGATGAATCGACATGG-CAGCTTGAACACAG 899
BSNT_03751___ 900 TATACCGCTCAAAAAAATACTTCCAAAAGTAAAAGCAAAAAACTGA 945
|.|.|||||.||||||||.|||||.|||||||||..||||||||||
RBAM_023470__ 900 TGTGCCGCTTAAAAAAATCCTTCCGAAAGTAAAAATAAAAAACTGA 945
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.