Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03765 and RBAM_023550
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:03
# Commandline: needle
# -asequence dna-align/BSNT_03765___yqzB.1.9828.seq
# -bsequence dna-align/RBAM_023550___yqzB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03765___yqzB-RBAM_023550___yqzB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03765___yqzB-RBAM_023550___yqzB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03765___yqzB
# 2: RBAM_023550___yqzB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 642
# Identity: 523/642 (81.5%)
# Similarity: 523/642 (81.5%)
# Gaps: 3/642 ( 0.5%)
# Score: 2151.0
#
#
#=======================================
BSNT_03765___ 1 ---GTGAGTACGATCGAACTAAATAAACGGCAAGAACATATTTTGCAGAT 47
|||||||||||||||.|||||||||||||||||||.|||||.|||||
RBAM_023550__ 1 GTGGTGAGTACGATCGAATTAAATAAACGGCAAGAACAAATTTTACAGAT 50
BSNT_03765___ 48 TGTAAAAGAAAACGGGCCGATTACAGGGGAGCATATTGCAGAAAAGCTGA 97
||||||.||||||||.||||||||.||.||||||||.||||||.||||.|
RBAM_023550__ 51 TGTAAAGGAAAACGGCCCGATTACCGGAGAGCATATCGCAGAACAGCTCA 100
BSNT_03765___ 98 ACCTAACCAGGGCGACATTGCGCCCGGATTTAGCCATACTCACCATGTCA 147
|..||||.|||||.||..||||.|||||.||.||||||||||||||||||
RBAM_023550__ 101 ATTTAACGAGGGCCACGCTGCGGCCGGACTTGGCCATACTCACCATGTCA 150
BSNT_03765___ 148 GGATTCCTCGAGGCGCGCCCGAGAGTCGGTTATTTCTATACGGGAAAAAC 197
||.|||.|.|||||.||.|||.|.|||||||||||.||||||||.|||||
RBAM_023550__ 151 GGCTTCTTAGAGGCCCGTCCGCGGGTCGGTTATTTTTATACGGGGAAAAC 200
BSNT_03765___ 198 CGGCACACAGCTTTTGGCAGATAAACTCAAAAAGCTTCAGGTGAAAGACT 247
.||.|..|||||..|.||.||||||||.||||||||.||.||||||||.|
RBAM_023550__ 201 GGGAAATCAGCTGCTTGCGGATAAACTGAAAAAGCTGCAAGTGAAAGATT 250
BSNT_03765___ 248 TTCAATCTATCCCCGTAGTGATTCACGAAAACGTTTCTGTGTACGATGCG 297
|||||||.|||||.||.||.||..|.||.||.||.||.||.||||||||.
RBAM_023550__ 251 TTCAATCGATCCCTGTTGTCATCAATGAGAATGTCTCGGTATACGATGCC 300
BSNT_03765___ 298 ATTTGCACCATGTTTTTAGAAGATGTAGGTACTCTGTTTGTGGTGGACCG 347
||.|||||||||||||||||||||||.||.||..|.|||||.||.||.||
RBAM_023550__ 301 ATCTGCACCATGTTTTTAGAAGATGTCGGCACGTTATTTGTCGTAGATCG 350
BSNT_03765___ 348 CGATGCTGTTTTAGTCGGGGTGCTTTCACGAAAAGACTTGCTCAGAGCGA 397
.||||||||.||||||||.|||||.|||||.|||||.|||||..|.||||
RBAM_023550__ 351 TGATGCTGTCTTAGTCGGTGTGCTGTCACGCAAAGATTTGCTGCGGGCGA 400
BSNT_03765___ 398 GCATTGGCCAGCAGGAGCTTACATCGGTCCCTGTTCACATCATCATGACA 447
||||.|||||||||||.|||.|.||..|.||.|||||.||.|||||||||
RBAM_023550__ 401 GCATCGGCCAGCAGGAACTTGCCTCAATACCGGTTCATATTATCATGACA 450
BSNT_03765___ 448 AGGATGCCGAACATTACGGTGTGCAGACGCGAGGATTATGTGATGGACAT 497
||.||||||||.||..|.||.|||.|.||.||.|||||||||||||||||
RBAM_023550__ 451 AGAATGCCGAATATCGCCGTCTGCCGGCGTGACGATTATGTGATGGACAT 500
BSNT_03765___ 498 TGCAAAGCACTTAATAGAAAAACAAATTGATGCACTGCCTGTCATCAAAG 547
.||.|||.|.|||||.||||||||.||.|||||.|||||.||.||.||||
RBAM_023550__ 501 CGCCAAGTATTTAATTGAAAAACAGATCGATGCCCTGCCCGTTATTAAAG 550
BSNT_03765___ 548 ACACCGATAAAGGCTTTGAAGTGATCGGCAGAGTGACAAAAACAAATATG 597
|.||.||||||||||||||.||.||||||.|..|.||.|||||.||||||
RBAM_023550__ 551 ATACGGATAAAGGCTTTGAGGTCATCGGCCGGTTTACCAAAACCAATATG 600
BSNT_03765___ 598 ACAAAAATACTTGTCAGTTTATCTGAAAATGAAATCTTATAA 639
||.||.|||||||||||||||||.||||||||||||.|||||
RBAM_023550__ 601 ACTAAGATACTTGTCAGTTTATCAGAAAATGAAATCATATAA 642
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