Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03810 and RBAM_023880

See Amino acid alignment / Visit BSNT_03810 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:08
# Commandline: needle
#    -asequence dna-align/BSNT_03810___comEB.1.9828.seq
#    -bsequence dna-align/RBAM_023880___comEB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03810___comEB-RBAM_023880___comEB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03810___comEB-RBAM_023880___comEB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03810___comEB
# 2: RBAM_023880___comEB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 577
# Identity:     457/577 (79.2%)
# Similarity:   457/577 (79.2%)
# Gaps:          14/577 ( 2.4%)
# Score: 1797.0
# 
#
#=======================================

BSNT_03810___      1 GTGGAACGAATTTCATGGAATCAATACTTTATGGCTCAAAGCCATTTATT     50
                     |||||||||||.||||||||||||||.||||||||.|||||||||||..|
RBAM_023880__      1 GTGGAACGAATCTCATGGAATCAATATTTTATGGCGCAAAGCCATTTGCT     50

BSNT_03810___     51 GGCGCTGCGCAGCACATGTCCGAGATTATCTGTCGGCGCTACTATAGTCA    100
                     |||||||.|.|||||||||||||||.|.||.|||||.||.||..||||||
RBAM_023880__     51 GGCGCTGAGAAGCACATGTCCGAGACTGTCAGTCGGGGCAACCGTAGTCA    100

BSNT_03810___    101 GAGACAAACGCATGATAGCAGGAGGCTACAATGGGTCAATCGCGGGCGGC    150
                     ||||.||.||.|||||.||.||.||.|||||.||.|||||.||.||||||
RBAM_023880__    101 GAGATAAGCGGATGATTGCCGGCGGATACAACGGCTCAATTGCCGGCGGC    150

BSNT_03810___    151 GTACATTGTGCAGATGAAGGATGCTTAATGATAGATGATCATTGCGCA-A    199
                     ||.|||||.||.||||||||||||.|..|.||||||.|||||||| || |
RBAM_023880__    151 GTCCATTGCGCTGATGAAGGATGCCTTTTAATAGATAATCATTGC-CAGA    199

BSNT_03810___    200 GAACCATTCACGCTGAAATGAATGCGATTCTTCAATGCTCTAAGTTTGGG    249
                     |.|||||.||.||.||.||||||||||||||.|||||.||||||||.||.
RBAM_023880__    200 GGACCATACATGCAGAGATGAATGCGATTCTGCAATGTTCTAAGTTCGGT    249

BSNT_03810___    250 GTGCCGACTGATGGAGCCGAGATTTATGTGACGCATTATCCGTGCATTCA    299
                     ||.|||||.||.||.|||||.||||||||||||||||||||.||.|||||
RBAM_023880__    250 GTTCCGACGGAGGGTGCCGAAATTTATGTGACGCATTATCCTTGTATTCA    299

BSNT_03810___    300 ATGCTGCAAATCTATTATTCAAGCGGGTATCAAAACGGTTTATTATGCTG    349
                     ||||||||||||.|||||.||.||.||.||||||||||||||||||||||
RBAM_023880__    300 ATGCTGCAAATCAATTATCCAGGCAGGCATCAAAACGGTTTATTATGCTG    349

BSNT_03810___    350 AGGATTACAAAACACATCCATATGCGCAGGAATTATTTGAACAG----GC    395
                     |.||||||||||||||.||.|||||..|.||..|.||    |||    ||
RBAM_023880__    350 AAGATTACAAAACACAGCCTTATGCAAAAGAGCTGTT----CAGCCAAGC    395

BSNT_03810___    396 GGGTGTAACAGTTGAACAGGTTGAACTCGATGAAATGATCGTTGATCTGA    445
                     .||.||.|..||.||.|||||.|||||.||||||||||||.|.|||||||
RBAM_023880__    396 CGGAGTCAAGGTGGAGCAGGTCGAACTTGATGAAATGATCATCGATCTGA    445

BSNT_03810___    446 AAAACAGGGAAAAGCTTTCATTTGTAGCGGGTCTTATAGGGAAATTGGCT    495
                     |||||.|.|||||..|.||.||||||||.|||||.||...|.||||..||
RBAM_023880__    446 AAAACCGCGAAAAATTGTCTTTTGTAGCAGGTCTGATTCAGCAATTATCT    495

BSNT_03810___    496 GATGC--CGGTTTAGCGGAGGAAGAATTGAAAAAGATACATGAACAGGCG    543
                     |||||  .||||.|  ||..||.|||.|||||||.||.|||||||||||.
RBAM_023880__    496 GATGCGGGGGTTAA--GGCAGATGAACTGAAAAAAATTCATGAACAGGCC    543

BSNT_03810___    544 AATACACTTTTCACGAGCTACGTGTGA    570
                     |||...||.||.||.||.|||||.|.|
RBAM_023880__    544 AATGAGCTGTTTACCAGTTACGTATAA    570


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