Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03814 and RBAM_023920

See Amino acid alignment / Visit BSNT_03814 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:09
# Commandline: needle
#    -asequence dna-align/BSNT_03814___yqeL.1.9828.seq
#    -bsequence dna-align/RBAM_023920___yqeL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03814___yqeL-RBAM_023920___yqeL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03814___yqeL-RBAM_023920___yqeL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03814___yqeL
# 2: RBAM_023920___yqeL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 358
# Identity:     291/358 (81.3%)
# Similarity:   291/358 (81.3%)
# Gaps:           2/358 ( 0.6%)
# Score: 1175.0
# 
#
#=======================================

BSNT_03814___      1 ATGAACCAAAAGTCCATTTTAAAGATCGCAGCTGCGGCTTGCGACGATAA     50
                     |||||.|||...|||.|.|||||.|||||.||....||.|||||||||||
RBAM_023920__      1 ATGAATCAAGCTTCCGTATTAAAAATCGCGGCAAAAGCATGCGACGATAA     50

BSNT_03814___     51 ACGGGCAGAGGATATTTTAGCACTGGATATGGAAGGTATTTCTCTGGTTG    100
                     |||.|||||.|||||||||||.|||||.||||||||.||.||.||..|.|
RBAM_023920__     51 ACGTGCAGAAGATATTTTAGCGCTGGACATGGAAGGAATCTCACTTATAG    100

BSNT_03814___    101 CTGATTATTTTCTGATCTGTCACGGAAATTCAGATAAACAGGTACAGGCG    150
                     |.|||||.|||.|.|||||.|||||.|||||.|||||.|||||.|||||.
RBAM_023920__    101 CGGATTACTTTTTAATCTGCCACGGGAATTCTGATAAGCAGGTTCAGGCA    150

BSNT_03814___    151 ATTGCCCGTGAAATCAAGGATCAGGCTGATGAAAACGGCATTCAAGTCAA    200
                     |||||.||||||||.||.||||||||.||.||||||||||||.|.|||||
RBAM_023920__    151 ATTGCGCGTGAAATTAAAGATCAGGCAGAAGAAAACGGCATTGATGTCAA    200

BSNT_03814___    201 AAAGATGGAAGGCTTTGATGAAGCAAGATGGGTTCTCGTTGATCTAGGCG    250
                     ||||||||||||.||||||||.||..|.|||.||.|.||||||||.||||
RBAM_023920__    201 AAAGATGGAAGGGTTTGATGAGGCCCGCTGGATTTTAGTTGATCTCGGCG    250

BSNT_03814___    251 ATGTGATTGTCCATGTCTTCCACAAGGACGAAAGAAGCTACTACAACCTT    300
                     |.||.||||||||.||.|||||.||.||.|||||||||||||||||.|||
RBAM_023920__    251 ACGTCATTGTCCACGTTTTCCATAAAGATGAAAGAAGCTACTACAATCTT    300

BSNT_03814___    301 GAAAAGCTGTGGGGAGACGCTCCGCTCGCAGATCTTGACCTTGGAATGAA    350
                     ||||||||.|||||.|||||.|||||||||||.|||||.||.||..||||
RBAM_023920__    301 GAAAAGCTATGGGGCGACGCGCCGCTCGCAGAGCTTGAACTCGGCTTGAA    350

BSNT_03814___    351 -TCAATGA    357
                      || ||||
RBAM_023920__    351 CTC-ATGA    357


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