Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03817 and RBAM_023950

See Amino acid alignment / Visit BSNT_03817 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:09
# Commandline: needle
#    -asequence dna-align/BSNT_03817___yqeI.1.9828.seq
#    -bsequence dna-align/RBAM_023950___yqeI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03817___yqeI-RBAM_023950___yqeI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03817___yqeI-RBAM_023950___yqeI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03817___yqeI
# 2: RBAM_023950___yqeI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 291
# Identity:     258/291 (88.7%)
# Similarity:   258/291 (88.7%)
# Gaps:           0/291 ( 0.0%)
# Score: 1158.0
# 
#
#=======================================

BSNT_03817___      1 ATGTTAACAGGTAAACAAAAACGTTTTTTGCGTTCTAAAGCGCATCATTT     50
                     |||||||||||.|||||||||||.|||||||||||.||||||||||||||
RBAM_023950__      1 ATGTTAACAGGAAAACAAAAACGGTTTTTGCGTTCAAAAGCGCATCATTT     50

BSNT_03817___     51 AACGCCGATTTTTCAAGTAGGTAAAGGCGGAGTAAACGACAACATGATTA    100
                     ||||||.|||||||||||.||.|||||||||||.|||||.||||||.|.|
RBAM_023950__     51 AACGCCTATTTTTCAAGTGGGAAAAGGCGGAGTCAACGAAAACATGGTGA    100

BSNT_03817___    101 AACAAATTGCTGAGGCGCTTGAAGCGAGAGAGCTGATTAAAGTCAGCGTG    150
                     ||||.|||||.|||||..|.|||||.||||||||||||||||||||||||
RBAM_023950__    101 AACAGATTGCCGAGGCTTTAGAAGCAAGAGAGCTGATTAAAGTCAGCGTG    150

BSNT_03817___    151 CTTCAGAATTGCGAAGAGGATAAAAACGATGTAGCGGAAGCTCTTGTAAA    200
                     |||||.||.||||||||.||||||||.|||||.||.|||||.|||||.||
RBAM_023950__    151 CTTCAAAACTGCGAAGACGATAAAAATGATGTCGCAGAAGCCCTTGTGAA    200

BSNT_03817___    201 AGGAAGCCGCTCTCAATTGGTGCAGACAATCGGCAATACGATTGTGTTAT    250
                     |||.|.||||||.||||||||||||||.|||||.||||||||.||.||.|
RBAM_023950__    201 AGGCACCCGCTCACAATTGGTGCAGACGATCGGAAATACGATCGTATTGT    250

BSNT_03817___    251 ATAAGGAATCAAAGGAAAATAAACAAATCGAGCTTCCTTAA    291
                     |||||||||||||||||||||||||||||||||||||.|||
RBAM_023950__    251 ATAAGGAATCAAAGGAAAATAAACAAATCGAGCTTCCGTAA    291


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