Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03944 and RBAM_024290

See Amino acid alignment / Visit BSNT_03944 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:13
# Commandline: needle
#    -asequence dna-align/BSNT_03944___yrzI.1.9828.seq
#    -bsequence dna-align/RBAM_024290___yrzI.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03944___yrzI-RBAM_024290___yrzI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03944___yrzI-RBAM_024290___yrzI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03944___yrzI
# 2: RBAM_024290___yrzI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 151
# Identity:     104/151 (68.9%)
# Similarity:   104/151 (68.9%)
# Gaps:          11/151 ( 7.3%)
# Score: 366.0
# 
#
#=======================================

BSNT_03944___      1 ATGACGATTAACCTATTCTTTTTAACGTTAACGATTAAAAAACGGTTTAA     50
                     |||||.|||||.||.|||||||||||..|.||.|||..|||.||.|||||
RBAM_024290__      1 ATGACCATTAATCTTTTCTTTTTAACACTGACCATTTCAAAGCGTTTTAA     50

BSNT_03944___     51 AAGCCTGGAAGAATTCGAACGAGAACAGCAGATTGAGCAGATTTATGATG    100
                     |||...||||||.|..|||||||||||||||.|.||..||.|||||.|||
RBAM_024290__     51 AAGTGCGGAAGAGTATGAACGAGAACAGCAGGTCGAAGAGTTTTATAATG    100

BSNT_03944___    101 AAATGAAAGAGTCTCAGTTAAAGCATCTTTAT-TTAACAAACTGGCGTTA    149
                     ||..||||||....|||.|.||.||..||||| |.|||.||         
RBAM_024290__    101 AAGCGAAAGAACGCCAGCTGAAACACTTTTATATGAACTAA---------    141

BSNT_03944___    150 A    150
                      
RBAM_024290__    141 -    141


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