Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03970 and RBAM_024450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:16
# Commandline: needle
# -asequence dna-align/BSNT_03970___yrrN.1.9828.seq
# -bsequence dna-align/RBAM_024450___yrrN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03970___yrrN-RBAM_024450___yrrN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03970___yrrN-RBAM_024450___yrrN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03970___yrrN
# 2: RBAM_024450___yrrN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 942
# Identity: 745/942 (79.1%)
# Similarity: 745/942 (79.1%)
# Gaps: 24/942 ( 2.5%)
# Score: 2888.0
#
#
#=======================================
BSNT_03970___ 1 ATGAAAAAACCAGAGCTCTTAGTGACGCCGAC--GAGCACAGCGGACATT 48
|||||||||||.||.||.||.|||||.||||| ..|.||| |||.|||
RBAM_024450__ 1 ATGAAAAAACCTGAACTTTTGGTGACTCCGACTTCTGTACA--GGATATT 48
BSNT_03970___ 49 TTGCCGCTCATACAGGCGGGGGCAACTGCGTTTTTAGTTGGGGAACAGAG 98
.|.||||||||.||.|||||.|||||.||..|.|||||.||.||||||||
RBAM_024450__ 49 CTTCCGCTCATTCAAGCGGGCGCAACGGCCCTGTTAGTCGGAGAACAGAG 98
BSNT_03970___ 99 ATACGGCTTGAGATTAGCCGGAGAATTTTCTCGTGAAGATGTAACAAAAG 148
|.|||||.|||||.|.|||||.||||||||..|.||||||.|||.|.|||
RBAM_024450__ 99 AAACGGCCTGAGACTGGCCGGTGAATTTTCAAGAGAAGATATAAAAGAAG 148
BSNT_03970___ 149 CCGTAGAGATTGCTCACAAAGAAGGAGCAAAAGTATACGTTGCTGTAAAT 198
|||||.|||..|||||..|.|||||.||.|||||.||||..||.||.|||
RBAM_024450__ 149 CCGTAAAGACAGCTCATCAGGAAGGCGCGAAAGTGTACGCCGCCGTCAAT 198
BSNT_03970___ 199 GCAATTTTCCATAACGATAAAGTGGGTGAGCTTGGCGAA----TATCTGG 244
||.|||||.||.|||||.|||||||..||||| ||| |||||.|
RBAM_024450__ 199 GCTATTTTTCACAACGAAAAAGTGGACGAGCT----GAACGGCTATCTTG 244
BSNT_03970___ 245 CTTTCTTAGCA-GAAGCCGGTGTCGATGCAGCGGTATTCGGCGATCCTGC 293
|.|| ||.||| ||.|||||.||.|||||.||.||.|||||.|||||.||
RBAM_024450__ 245 CCTT-TTTGCAGGAGGCCGGCGTTGATGCGGCTGTTTTCGGTGATCCGGC 293
BSNT_03970___ 294 CGTGCTGATGGCTGCCCGTGAATCTGCGCCTGCTCTGAAGCTTCATTGGA 343
|||..|.|||||.||.||||||.|.||.||.|..||.||.||.|||||||
RBAM_024450__ 294 CGTTTTAATGGCGGCGCGTGAAGCGGCTCCCGAGCTTAAACTGCATTGGA 343
BSNT_03970___ 344 GCACAGAAACGACAGGCACCAACTATTATACATGCAACTACTGGGGACGC 393
||||.|||||.||.||.||||||||.|||.|.|||||.||||||||||||
RBAM_024450__ 344 GCACGGAAACAACGGGAACCAACTACTATTCCTGCAATTACTGGGGACGC 393
BSNT_03970___ 394 AAGGGTG--CGGCGCGCTCTGTGCTTGCCAGAGAATTAAACATGGACAGC 441
||.||.| |||||.| |.|||||.||.|..||||||||.|||||||||
RBAM_024450__ 394 AAAGGCGCACGGCGGG--CAGTGCTGGCTAAGGAATTAAATATGGACAGC 441
BSNT_03970___ 442 ATTGTTGAGATTAAAGAAAATGCGGAAGTCGAAATTGAAATCCAGGTGCA 491
||..||||.||.||||||||.||.|||||.|||||||||||.||..|.||
RBAM_024450__ 442 ATCATTGACATAAAAGAAAACGCCGAAGTGGAAATTGAAATTCAAATCCA 491
BSNT_03970___ 492 TGGAATGACATGCATGTTCCAATCGAAGCGTTCTTTGATTGGAAACTATT 541
.||.|||||.||||||||||||||||||||||||||..|.||..|.||.|
RBAM_024450__ 492 CGGCATGACGTGCATGTTCCAATCGAAGCGTTCTTTAGTGGGCCATTACT 541
BSNT_03970___ 542 TTGAATATCAGGGCAAAGTCATGGACATTGAA-AGAAAGAAAAAAGAATC 590
|.|||||.||.||.||||||||||||||.||| || ||||||||||||.|
RBAM_024450__ 542 TCGAATACCAAGGTAAAGTCATGGACATCGAACAG-AAGAAAAAAGAAGC 590
BSNT_03970___ 591 AGGCATGTTTTTACACGATAAAGAACGTGATAATAAATATCCGATTTTCG 640
.||.||||||.|.||.||.||.|||||.|..||||||||.||||||||.|
RBAM_024450__ 591 GGGGATGTTTCTGCATGACAAGGAACGGGGCAATAAATACCCGATTTTTG 640
BSNT_03970___ 641 AAGATGAAAACGGCACTCACATCATGAGCCCGAACGATGTGTGCATCATT 690
||||||||||||||||.|||||||||||||||||||||||||||||.|||
RBAM_024450__ 641 AAGATGAAAACGGCACGCACATCATGAGCCCGAACGATGTGTGCATGATT 690
BSNT_03970___ 691 GATGAGCTCGAGGAATTGATAGATGCCGGAATTGATTCTTTCAAAATCGA 740
|||||..|.|||||..||||.||.|||||.||.|||||||||||||||||
RBAM_024450__ 691 GATGAATTAGAGGACCTGATGGACGCCGGCATCGATTCTTTCAAAATCGA 740
BSNT_03970___ 741 TGGTGTTTTGAAAACGCCTGAATACCTAATAGAAGTCACCAAAATGTACA 790
.||.||||||||..|.|||||||||.|||..|||||.|||...|||||||
RBAM_024450__ 741 CGGAGTTTTGAAGTCTCCTGAATACTTAACTGAAGTGACCCGCATGTACA 790
BSNT_03970___ 791 GAGAAGCAATTGATTTGTGCGTGGAAAACCGTGACGA-ATACGAAGCGAA 839
||||||||||.|||||||||.|.||||.|||.|| || ||||||||.|||
RBAM_024450__ 791 GAGAAGCAATCGATTTGTGCTTCGAAAGCCGAGA-GACATACGAAGAGAA 839
BSNT_03970___ 840 AAAAGAAGA-CTGGATCGAACGCATTGAAAGCATCCAGCCAGTAAACAGA 888
||||| ||| ||||||.||.||.|||||||||||.|||||.||.||||||
RBAM_024450__ 840 AAAAG-AGAGCTGGATAGAGCGGATTGAAAGCATTCAGCCTGTGAACAGA 888
BSNT_03970___ 889 AAAATTGATACCGGATTCTTCTTCAAGGAAACGGTTTATTAA 930
|..||.|||||.|||||||||||.||.||||||||.||||||
RBAM_024450__ 889 AGCATCGATACAGGATTCTTCTTTAAAGAAACGGTCTATTAA 930
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