Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03975 and RBAM_024490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:16
# Commandline: needle
# -asequence dna-align/BSNT_03975___yrrK.1.9828.seq
# -bsequence dna-align/RBAM_024490___yrrK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03975___yrrK-RBAM_024490___yrrK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03975___yrrK-RBAM_024490___yrrK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03975___yrrK
# 2: RBAM_024490___yrrK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 417
# Identity: 363/417 (87.1%)
# Similarity: 363/417 (87.1%)
# Gaps: 0/417 ( 0.0%)
# Score: 1599.0
#
#
#=======================================
BSNT_03975___ 1 ATGAGAATATTAGGGCTCGATTTAGGAACCAAAACACTCGGTGTTGCTCT 50
|||||||||||.||.||.|||.|.|||||.|||||||||||.||.|||.|
RBAM_024490__ 1 ATGAGAATATTGGGACTTGATCTTGGAACGAAAACACTCGGCGTAGCTTT 50
BSNT_03975___ 51 GAGCGATGAAATGGGCTGGACTGCTCAAGGCATTGAGACCATAAAGATAA 100
.||||||||||||||||||||.|||||||||||||||||.|||||.||||
RBAM_024490__ 51 AAGCGATGAAATGGGCTGGACCGCTCAAGGCATTGAGACGATAAAAATAA 100
BSNT_03975___ 101 ATGAAGCAGAGGGCGATTATGGTTTATCCCGTTTATCTGAACTGATAAAG 150
|.||.||.||.||.|||||.|||.|...|||||||||.||.|||||.||.
RBAM_024490__ 101 ACGAGGCTGAAGGAGATTACGGTCTGGACCGTTTATCCGAGCTGATGAAA 150
BSNT_03975___ 151 GACTATACTATAGATAAAATCGTGCTCGGCTTTCCTAAGAACATGAACGG 200
|||||||.|.||||.||.|||||||||||.|||||.||.|||||||||||
RBAM_024490__ 151 GACTATAATGTAGAGAAGATCGTGCTCGGTTTTCCGAAAAACATGAACGG 200
BSNT_03975___ 201 AACAGTCGGCCCAAGAGGCGAAGCCAGCCAAACATTTGCGAAAGTGCTTG 250
.||..||||.||.||||||||||||||||||||||||||||||.||||||
RBAM_024490__ 201 GACGATCGGTCCGAGAGGCGAAGCCAGCCAAACATTTGCGAAACTGCTTG 250
BSNT_03975___ 251 AAACAACGTACAATGTTCCTGTTGTGCTGTGGGACGAGCGTCTTACCACA 300
|||||.||||||||||.||||||||||||||||||||||||||.||.||.
RBAM_024490__ 251 AAACAGCGTACAATGTCCCTGTTGTGCTGTGGGACGAGCGTCTGACGACG 300
BSNT_03975___ 301 ATGGCGGCTGAAAAAATGCTGATTGCAGCTGACGTCAGCAGGCAAAAACG 350
|||||||||||||||||||||||.||.|||||||||||||||||||||||
RBAM_024490__ 301 ATGGCGGCTGAAAAAATGCTGATCGCGGCTGACGTCAGCAGGCAAAAACG 350
BSNT_03975___ 351 AAAAAAAGTCATTGATAAAATGGCGGCTGTTATGATTTTACAAGGATATC 400
||||||||||||||||||||||||||||||.|||||..|.||||||||||
RBAM_024490__ 351 AAAAAAAGTCATTGATAAAATGGCGGCTGTCATGATCCTTCAAGGATATC 400
BSNT_03975___ 401 TTGACAGCTTAAATTAA 417
|.|||||.|||||.|||
RBAM_024490__ 401 TGGACAGTTTAAACTAA 417
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