Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_03976 and RBAM_024500

See Amino acid alignment / Visit BSNT_03976 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:16
# Commandline: needle
#    -asequence dna-align/BSNT_03976___yrzL.1.9828.seq
#    -bsequence dna-align/RBAM_024500___yrzL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_03976___yrzL-RBAM_024500___yrzL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03976___yrzL-RBAM_024500___yrzL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03976___yrzL
# 2: RBAM_024500___yrzL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity:     238/267 (89.1%)
# Similarity:   238/267 (89.1%)
# Gaps:           0/267 ( 0.0%)
# Score: 1074.0
# 
#
#=======================================

BSNT_03976___      1 GTGAGCTCGTTTGATAAAACGATGAAATTTAATTTCTCCGATGATTCTGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_024500__      1 GTGAGCTCGTTTGATAAAACGATGAAATTTAATTTCTCCGATGATTCTGC     50

BSNT_03976___     51 TGAGACTAACGTAAATGAGGTGCTGATTACAGTGTATGACGCGCTTCAGG    100
                     |||.||.|||||..|.||.|||||||.|||.||.|||||.||||||||||
RBAM_024500__     51 TGAAACAAACGTCGAAGAAGTGCTGAATACGGTATATGATGCGCTTCAGG    100

BSNT_03976___    101 AAAAGGGCTACAATCCAATCAACCAAATTGTCGGGTACTTGCTGTCAGGT    150
                     |||||||.||||||||.||||||||.||||||||.|||||||||||.||.
RBAM_024500__    101 AAAAGGGGTACAATCCTATCAACCAGATTGTCGGATACTTGCTGTCTGGA    150

BSNT_03976___    151 GATCCCGCTTATATTCCTAGGCATCGTGACGCTCGCAATTTAATTCGCAA    200
                     |||||.||.||.||||||||||||||.|||||.||.||.|||||||||||
RBAM_024500__    151 GATCCTGCATACATTCCTAGGCATCGCGACGCCCGGAACTTAATTCGCAA    200

BSNT_03976___    201 ACTTGAAAGAGACGAATTAATCGAGGAATTGGTAAAGTCTTATTTAGAAC    250
                     |||.|||.|.||||||||||||||||||||||||||.||.|||.||||||
RBAM_024500__    201 ACTGGAACGTGACGAATTAATCGAGGAATTGGTAAAATCCTATCTAGAAC    250

BSNT_03976___    251 AGCATAAAGAGGCGTAA    267
                     |||||||||||||||||
RBAM_024500__    251 AGCATAAAGAGGCGTAA    267


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