Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03984 and RBAM_024550
See
Amino acid alignment /
Visit
BSNT_03984 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:17
# Commandline: needle
# -asequence dna-align/BSNT_03984___glnM.1.9828.seq
# -bsequence dna-align/RBAM_024550___glnM.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03984___glnM-RBAM_024550___glnM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03984___glnM-RBAM_024550___glnM.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03984___glnM
# 2: RBAM_024550___glnM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 657
# Identity: 511/657 (77.8%)
# Similarity: 511/657 (77.8%)
# Gaps: 12/657 ( 1.8%)
# Score: 1928.0
#
#
#=======================================
BSNT_03984___ 1 ATGAATGTGTCAATTCTTTTC-GATAACTTCGGCATGTATATGGACGGTT 49
|||||..|.|||||| ||..| ||.|||||||..||||||||.|||||||
RBAM_024550__ 1 ATGAACTTTTCAATT-TTAACGGAAAACTTCGATATGTATATTGACGGTT 49
BSNT_03984___ 50 TTTACCATACCTTGCTTGCAAGTGTTATCGCGCTGGCCGGCAGTTTTGTC 99
|....||.||.||||||||.||..|.|||||||||||.|||||.||||..
RBAM_024550__ 50 TCCTGCACACATTGCTTGCGAGCTTCATCGCGCTGGCAGGCAGCTTTGCG 99
BSNT_03984___ 100 CTCGGCGTTACTG-TAGCGGTTATGAGAATAACAGTCTTT-AAGCCGCTG 147
||.|||||| ||| |.||.||.||||||||.|| |.|||| ||.||.||.
RBAM_024550__ 100 CTGGGCGTT-CTGATCGCAGTCATGAGAATCAC-GGCTTTCAAACCCCTT 147
BSNT_03984___ 148 CAATGGCTCGGGACCGTATATGTAGAATTCATCCGCAACATCCCTCTTCT 197
||||||.||||.||.|..|||||.|||||.||||||||||||||.|||||
RBAM_024550__ 148 CAATGGATCGGCACTGCGTATGTGGAATTTATCCGCAACATCCCGCTTCT 197
BSNT_03984___ 198 TTTAATTACCTTTGTTTTCTATTTCGGACTTCCAAACGCAGGCCTGAGGC 247
..|.||.||.||.|||||.||||||||||||||.|||||.||.|||||.|
RBAM_024550__ 198 CCTCATCACATTCGTTTTTTATTTCGGACTTCCGAACGCTGGGCTGAGAC 247
BSNT_03984___ 248 TTGACGGTTTTCAAGCGGGAACGGTTGCTCTCACCATTTATACCTCTGCG 297
|.|||||.|||||.|||||||||.||||.||.||.||||||||.|||||.
RBAM_024550__ 248 TGGACGGCTTTCAGGCGGGAACGATTGCGCTGACGATTTATACGTCTGCC 297
BSNT_03984___ 298 TTTATCGCTGAAGCCATCAGAGCAGGAATCCAGTCTGTTTCAAAAGGGCA 347
||||||||.||||||||||||||.|||||.|||.||||.|||||||||||
RBAM_024550__ 298 TTTATCGCAGAAGCCATCAGAGCCGGAATTCAGACTGTCTCAAAAGGGCA 347
BSNT_03984___ 348 GATGGAAGCGGCACGCTCGTCAGGCTTTACCTACAGCCAAGCCATGCTCC 397
||||||||||||..|.|||||||||||.||.|||||.||.||.||| ..
RBAM_024550__ 348 GATGGAAGCGGCCAGATCGTCAGGCTTCACATACAGTCAGGCGATG--AG 395
BSNT_03984___ 398 ATA--TCATTTTGCCGCAGGCAATCAAAATCGTCATGCCGCCTTTAGGCA 445
||| |||||.|.||.|||||..|.||||||||.||.||.||..|.||.|
RBAM_024550__ 396 ATACGTCATTCTTCCTCAGGCCGTAAAAATCGTGATTCCCCCGCTCGGAA 445
BSNT_03984___ 446 ATCAATTTTTAAACTTAGTCAAAAACTCTTCGATTCTTGGGGTTGTGGCC 495
|.||||||.|.|||.|.|||||||||||.||.||.||.||.||.|||||.
RBAM_024550__ 446 ACCAATTTCTCAACCTTGTCAAAAACTCATCAATACTCGGAGTGGTGGCG 495
BSNT_03984___ 496 GGATTGGATCTTATGTACCAGGCTGATTTAGTCTCGTCGAGCACACTCGT 545
|||.|.|||.|.|||||.|||||.|||.|.||.||.||.|||||.||.||
RBAM_024550__ 496 GGACTCGATTTGATGTATCAGGCGGATCTCGTTTCCTCAAGCACTCTTGT 545
BSNT_03984___ 546 TGTATTTGATGTTTATATTTTCGTGGCGCTTTTTTACTTAGTGCTGACGA 595
.||.||||||||.|||||||||||.|||||||||||.||..|..|.||||
RBAM_024550__ 546 CGTGTTTGATGTCTATATTTTCGTCGCGCTTTTTTATTTGATAGTAACGA 595
BSNT_03984___ 596 TTCCGCTTAGCATCGGTGTTAACTATCTGGAAAAACGGCTGGAAAAAAGC 645
|.|||||.||||||||.|||.|||||.||||||.|||.||.|.|||.||.
RBAM_024550__ 596 TCCCGCTCAGCATCGGGGTTCACTATTTGGAAAGACGTCTCGGAAAGAGT 645
BSNT_03984___ 646 TATTGA- 651
|||| |
RBAM_024550__ 646 TATT-AG 651
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.