Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03992 and RBAM_024610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:18
# Commandline: needle
# -asequence dna-align/BSNT_03992___trmU.1.9828.seq
# -bsequence dna-align/RBAM_024610___mnmA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03992___trmU-RBAM_024610___mnmA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03992___trmU-RBAM_024610___mnmA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03992___trmU
# 2: RBAM_024610___mnmA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1119
# Identity: 943/1119 (84.3%)
# Similarity: 943/1119 (84.3%)
# Gaps: 6/1119 ( 0.5%)
# Score: 4003.5
#
#
#=======================================
BSNT_03992___ 1 ATGGAAAAACGGCCGGAGGATACAAGAGTCGTCGTCGGCATGTCCGGCGG 50
||||||||||||||||||||||||||||||||.|||||||||||||||||
RBAM_024610__ 1 ATGGAAAAACGGCCGGAGGATACAAGAGTCGTAGTCGGCATGTCCGGCGG 50
BSNT_03992___ 51 AGTAGACTCATCTGTGGCGGCCCTGCTGTTAAAAGAACAGGGCTATGATG 100
.||.|||||.||.|||||||||||.|||.|.||.||.||||||||.||||
RBAM_024610__ 51 CGTGGACTCTTCCGTGGCGGCCCTTCTGCTGAAGGAGCAGGGCTACGATG 100
BSNT_03992___ 101 TAATCGGAATCTTTATGAAAAACTGGGATGATACGGACGAAAACGGTTTT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_024610__ 101 TAATCGGAATCTTTATGAAAAACTGGGATGATACGGACGAAAACGGTTTT 150
BSNT_03992___ 151 TGCACGGCGACAGAGGATTATGAAGATGTGATCCGCGTCTGCAACCAAAT 200
|||||||||||.||.|||||||||||.||.|||||.|||||||||||.||
RBAM_024610__ 151 TGCACGGCGACGGAAGATTATGAAGACGTCATCCGGGTCTGCAACCAGAT 200
BSNT_03992___ 201 CGGAATTCCGTATTATGCCGTAAACTTTGAAAAGCAATATTATGAGAAGG 250
|||||||||||||||||||||.||.|||||.||||||||||..||.||||
RBAM_024610__ 201 CGGAATTCCGTATTATGCCGTCAATTTTGAGAAGCAATATTGGGAAAAGG 250
BSNT_03992___ 251 TATTTCAATACTTCCTTGATGAATATAAAGCAGGCAGAACACCAAACCCG 300
||||||||||.||||||||||||||||||||.||.|||||.||.||.|||
RBAM_024610__ 251 TATTTCAATATTTCCTTGATGAATATAAAGCCGGAAGAACCCCCAATCCG 300
BSNT_03992___ 301 GATGTATTGTGCAACAAAGAAATTAAATTCAAGGCCTTTTTGGAGCATGC 350
|||||..|||||||.|||||||||||.||.|||||.||.|||||.|||||
RBAM_024610__ 301 GATGTCATGTGCAATAAAGAAATTAAGTTTAAGGCTTTCTTGGATCATGC 350
BSNT_03992___ 351 ATTGTCACTTGGCGCCGACTATTTAGCGACTGGCCACTATGCAAGAGTAG 400
..|||||||.|||||.||.|||.|.|||||.|||||.||.||..|.||.|
RBAM_024610__ 351 TCTGTCACTCGGCGCGGATTATCTTGCGACGGGCCATTACGCCCGCGTGG 400
BSNT_03992___ 401 ACAGAAGCGGCGAAAAAGTCAGAATGCTGCGCGGCATTGATGAAAACAAG 450
|||||||||..|..|.|||..|.|||||.|||||..|.||||||||||||
RBAM_024610__ 401 ACAGAAGCGCAGGTACAGTGCGCATGCTCCGCGGTCTGGATGAAAACAAG 450
BSNT_03992___ 451 GATCAAACGTACTTCTTGAATCAGCTGA--CAGAAGATAC-GCTGAGCAA 497
||.||.||.||.||..||||||||||.| |||.| || |||.|||||
RBAM_024610__ 451 GACCAGACTTATTTTCTGAATCAGCTCAATCAGGA---ACAGCTCAGCAA 497
BSNT_03992___ 498 AGTCATGTTCCCGATCGGCGAACTTCAAAAAAGCCGTGTGCGTGAAATCG 547
||||||||||||||||||.||.||.|||||||||||.|||||.|||||||
RBAM_024610__ 498 AGTCATGTTCCCGATCGGTGATCTGCAAAAAAGCCGCGTGCGGGAAATCG 547
BSNT_03992___ 548 CCAAAGAAGCAGAACTTGCAACGGCGACGAAAAAAGACAGTACAGGCATC 597
||||||||||.||||||||.||.||..|||||||||||||.||.||.|||
RBAM_024610__ 548 CCAAAGAAGCGGAACTTGCGACAGCTGCGAAAAAAGACAGCACGGGAATC 597
BSNT_03992___ 598 TGCTTTATCGGCGAACGCAACTTCAAAACGTTTCTCAGCCAATATCTCCC 647
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_024610__ 598 TGCTTTATCGGCGAACGCAACTTCAAAACGTTTCTCAGCCAATATCTCCC 647
BSNT_03992___ 648 TGCACAGCCGGGCGATATGATGACGATGGACGGCGAAGTAAAAGGCCGCC 697
.||.||||||||||||||||||||.||||||||.|||||||||||.||.|
RBAM_024610__ 648 CGCTCAGCCGGGCGATATGATGACAATGGACGGAGAAGTAAAAGGGCGTC 697
BSNT_03992___ 698 ACGACGGGTTGATGTACTATACGATCGGACAGCGTCACGGCCTTGGCATC 747
|.|||||..|||||||.|||||.|||||||||||.|||||.|||||.|||
RBAM_024610__ 698 ATGACGGTCTGATGTATTATACTATCGGACAGCGCCACGGTCTTGGAATC 747
BSNT_03992___ 748 GGCGGAAGCGGCGAGCCGTGGTTTGCGGTAGGGAAAGATCTTGAAAAGAA 797
|||||||||||||||||||||||.||.||.||.||||||||||||||.||
RBAM_024610__ 748 GGCGGAAGCGGCGAGCCGTGGTTCGCCGTCGGTAAAGATCTTGAAAAAAA 797
BSNT_03992___ 798 CATCCTCTACGTAGATCAAGGGTTCCATAACCCTCTTTTATATTCCGACA 847
|||.||.||.||.||||||||.||||||||.||.|||.|.|||||.||.|
RBAM_024610__ 798 CATTCTGTATGTTGATCAAGGATTCCATAATCCGCTTCTGTATTCTGATA 847
BSNT_03992___ 848 AAATCACAGCAACAAATATCAGCTGGGTACGTTCGGATATCATGAAGGGC 897
|.|||||.||.||||||.||||||||...|||.|.|.|.|.|||.|.|||
RBAM_024610__ 848 AGATCACGGCGACAAATGTCAGCTGGACGCGTCCCGGTCTGATGGACGGC 897
BSNT_03992___ 898 GAAGAGATTTCCTGCACGGCTAAATTCCGTTACCGCCAAGAGGATCATAA 947
|..||.||..|.||||||||.||||||||.|||||.||.||.|||||.||
RBAM_024610__ 898 GGCGAAATGACATGCACGGCGAAATTCCGCTACCGTCAGGAAGATCACAA 947
BSNT_03992___ 948 AGTAACAGTGCGCATGACTGGCGAAGGTGAAGCGGAAGTCATCTTTGATG 997
||||||.|||...|||||.||.||.|.|||||||||||||||.|||||.|
RBAM_024610__ 948 AGTAACGGTGAAAATGACGGGTGATGATGAAGCGGAAGTCATTTTTGACG 997
BSNT_03992___ 998 AACAAGTCCGCGCTGTAACGCCGGGACAAGCCGTTGTCTTCTATGACGGC 1047
..||.||.|||||.||.|||||||||||||||||.||.||.||||||||.
RBAM_024610__ 998 GGCAGGTACGCGCCGTTACGCCGGGACAAGCCGTCGTTTTTTATGACGGA 1047
BSNT_03992___ 1048 GAAGAATGCCTTGGCGGCGGGACAATTGATGATGTGTACAAAGACGGAAC 1097
|||||.|||||.||||||||.||.||.|||||.||.||.|||||||||||
RBAM_024610__ 1048 GAAGAGTGCCTCGGCGGCGGAACGATAGATGACGTTTATAAAGACGGAAC 1097
BSNT_03992___ 1098 AAAATTGTGGTACGTATAA 1116
||||.||||||||||||||
RBAM_024610__ 1098 AAAACTGTGGTACGTATAA 1116
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