Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04014 and RBAM_024780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:22
# Commandline: needle
# -asequence dna-align/BSNT_04014___spoVB.1.9828.seq
# -bsequence dna-align/RBAM_024780___spoVB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04014___spoVB-RBAM_024780___spoVB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04014___spoVB-RBAM_024780___spoVB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04014___spoVB
# 2: RBAM_024780___spoVB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1591
# Identity: 1229/1591 (77.2%)
# Similarity: 1229/1591 (77.2%)
# Gaps: 68/1591 ( 4.3%)
# Score: 4684.0
#
#
#=======================================
BSNT_04014___ 1 ATGGCGAAACAGACGTTTTTAAAGGGCACTCTTATCCTTATCGCAGCAGG 50
|||||.||||||||.|||||||..|||||||||||.||.||||||||.||
RBAM_024780__ 1 ATGGCAAAACAGACTTTTTTAAGAGGCACTCTTATTCTCATCGCAGCCGG 50
BSNT_04014___ 51 AATGGTTACAAGAATGCTCGGGTTTGTCAACCGGGTGGTTATCGCCCGTT 100
.|||.||||.|||||||||||.||||||||||||||||||||||||||.|
RBAM_024780__ 51 GATGATTACGAGAATGCTCGGCTTTGTCAACCGGGTGGTTATCGCCCGGT 100
BSNT_04014___ 101 TTATCGGTGAAGAAGGAGTCGGGCTTTACATGATGGCAGCGCCTACCTTC 150
||||||||||||||||.|||||..|.|||||||||||.||.||.||.||.
RBAM_024780__ 101 TTATCGGTGAAGAAGGGGTCGGTTTATACATGATGGCTGCCCCGACATTT 150
BSNT_04014___ 151 TTCTTGGCCACTACATTAACTCAATTCGGTCTGCCGGTCGCGATCAGCAA 200
|||||||||||.||.||.|||||||||||.||.||.||.||.||||||||
RBAM_024780__ 151 TTCTTGGCCACCACTTTGACTCAATTCGGCCTCCCCGTTGCCATCAGCAA 200
BSNT_04014___ 201 GCTAGTCGCTGAAGCCAGTGCGCGCGGAGATCATCAAAAAACGAAAAATA 250
.||.|||||||||||.||.|||||.||.||.|..||.||||.||||.|.|
RBAM_024780__ 201 ACTTGTCGCTGAAGCGAGCGCGCGGGGGGACCGGCAGAAAATGAAACACA 250
BSNT_04014___ 251 TTTTAGTCATGTCTCTGACCATCA-CGGGAGTGCTCAGCCTCATCTTTAC 299
|||||||.|||||.||.|||.||| ||||| |..|.||.||||||||.||
RBAM_024780__ 251 TTTTAGTGATGTCGCTTACCGTCACCGGGA-TATTAAGTCTCATCTTCAC 299
BSNT_04014___ 300 ACCGCTGTTTCTGTTTTTCGCCCCGGTTATGGCTGAAACGATGCTGACAG 349
.|||||||||.|.|..||.||.|||.|||||.|.||||||||||||||.|
RBAM_024780__ 300 GCCGCTGTTTTTATGCTTTGCGCCGATTATGTCCGAAACGATGCTGACGG 349
BSNT_04014___ 350 ATAAGCGAACACTGTATCCGCTCTTGGCCATTACGCCGGTTGTGCCGATT 399
||.||||.||..|.||.|||||..||||.||||||||.||.|||||||||
RBAM_024780__ 350 ATCAGCGCACGGTTTACCCGCTTCTGGCGATTACGCCCGTCGTGCCGATT 399
BSNT_04014___ 400 ATTGCTATATCGAGTGTGCTGAGGGGATACTTTCAAGGAAAACAGAATAT 449
||.||.||.||.||.||||||.|.||.||||||||.||.|..||||||||
RBAM_024780__ 400 ATCGCGATCTCCAGCGTGCTGCGCGGTTACTTTCAGGGCAGGCAGAATAT 449
BSNT_04014___ 450 GAACCCGCTTGCTATGTCACAAGTCCTTGAACAGGTCGTCCGCATTTCAC 499
|||||||||.||..|.||.|||||.|||||.|||.||||.||.|||||||
RBAM_024780__ 450 GAACCCGCTGGCGTTTTCCCAAGTGCTTGAGCAGATCGTGCGGATTTCAC 499
BSNT_04014___ 500 TCGTGGCTGTCTGCACAACGATTTTTCTCCCTTACGGAATTGAATATGCT 549
|.||.||.||||||||.|||.|.|||||.||.|||||.|||||||||||.
RBAM_024780__ 500 TTGTCGCGGTCTGCACGACGGTGTTTCTGCCGTACGGGATTGAATATGCC 549
BSNT_04014___ 550 GCAGCGGGGGCAATGCTATCCTCAGTGGCA--GGGGAGCTGGCATCACTT 597
|||||.||.||.|||.|.||.|| ||.|| ||||||||.||.||.|||
RBAM_024780__ 550 GCAGCCGGAGCTATGATTTCGTC--TGTCATCGGGGAGCTTGCCTCTCTT 597
BSNT_04014___ 598 CTTTATTTATTCGTTTGCTTT-AAGTATAAAAAGACAATTAAAATCAGAA 646
.|||||||||||.||||.||| |||.| ||.||.|||||.|.||||||||
RBAM_024780__ 598 ATTTATTTATTCATTTGTTTTAAAGCA-AATAAAACAATCAGAATCAGAA 646
BSNT_04014___ 647 AGCATTTTTTCCAGTCAATTAAAAACGGAAAACAAACCTTTACCCAATTA 696
|.||.||||||.||||.|||..|||.||||||.|||||||...|||..|.
RBAM_024780__ 647 AACAATTTTTCAAGTCGATTGCAAATGGAAAAGAAACCTTCCGCCAGCTG 696
BSNT_04014___ 697 ATGAGCGTGTCCCTTCCAACAACCGGGAGCCGCTTTATCGGAAACCTCTC 746
|||||||||||.||.||.||||||||.||||||||.||||||||..|.||
RBAM_024780__ 697 ATGAGCGTGTCGCTCCCGACAACCGGAAGCCGCTTCATCGGAAATTTATC 746
BSNT_04014___ 747 TTGGTTTTTCGAGCCAATCGTCGTCGCTCAAAGCCTTGCCATCGCCGGTG 796
|||||||||.||.||.||.||||||||.||.||||||||.||.||.||.|
RBAM_024780__ 747 TTGGTTTTTTGAACCTATTGTCGTCGCGCAGAGCCTTGCGATTGCAGGAG 796
BSNT_04014___ 797 TGGCAACAGTTGCCGCAACAAAGCAATACGGGGAACTGACCGGCTTTGCC 846
||||.||.|.||||||.||.|..||.||||||||.||||||||.||||||
RBAM_024780__ 797 TGGCCACCGCTGCCGCCACCAGCCAGTACGGGGAGCTGACCGGATTTGCC 846
BSNT_04014___ 847 ATGACGCTGCTGACTCTGCCCAGCTTTATTACATATTCTTTGTCGACCGC 896
||||||.|..||||.||||||||||||||.||.||||||.||||.||.||
RBAM_024780__ 847 ATGACGGTTTTGACGCTGCCCAGCTTTATAACCTATTCTCTGTCAACGGC 896
BSNT_04014___ 897 GCTTGTTCCTGCGATCAGTGAAGGAATGGAGCAGAAAAAATTGCAGGTGG 946
|||||||||||||||||||||||||||||||||.|||||..||||.||.|
RBAM_024780__ 897 GCTTGTTCCTGCGATCAGTGAAGGAATGGAGCAAAAAAAGCTGCAAGTTG 946
BSNT_04014___ 947 TGGAATACCGCTTGGAACAGGCGATGCGTCTCTGTCTGCTCAGCGGAGGC 996
|.||||||||..||||||||||||||.|.||.|||||..|.|||||||||
RBAM_024780__ 947 TCGAATACCGTCTGGAACAGGCGATGAGGCTGTGTCTTTTAAGCGGAGGC 996
BSNT_04014___ 997 ATTTCAGTTGTTATTTTATT-TGTATTTGCGGATGAGCTGATGAGAGTGA 1045
|||||.||.||||||||||| |.| ||.||.|||||.||||||...||.|
RBAM_024780__ 997 ATTTCGGTGGTTATTTTATTCTCT-TTCGCTGATGAACTGATGTCCGTCA 1045
BSNT_04014___ 1046 TGTACGGTTC--TTCAGGCGCAGCTGTATTTATAAAAGTGATGGCCCCGT 1093
|||||||.|| .|.|.||| ||.||||||.|.|||||||||||.||||
RBAM_024780__ 1046 TGTACGGATCAACTAATGCG--GCGGTATTTGTTAAAGTGATGGCGCCGT 1093
BSNT_04014___ 1094 TTTTTCTGCTTTATTATTTTCAAGGCCCGCTTCAAGCTGTGCTGCAGGCG 1143
|||||||||||||.||||||||.||.||.|||||.||.|||||||||||.
RBAM_024780__ 1094 TTTTTCTGCTTTACTATTTTCAGGGGCCCCTTCAGGCGGTGCTGCAGGCT 1143
BSNT_04014___ 1144 CTTAATTTGGCAGGAGCTGCGATGATGAACAGCTTAATCGGAG-CGCTAG 1192
||.|||||.||.||.||.||.|||||||||||.||.|||||.| |||| |
RBAM_024780__ 1144 CTCAATTTAGCCGGGGCCGCCATGATGAACAGTTTTATCGGCGCCGCT-G 1192
BSNT_04014___ 1193 TCAAAACAGGCCTTATTTTTGTCCTTGCCACAAGGCCTTCTCTT-GGCAT 1241
|||||||.|||||.||||||||..|.||.||.|||||||| ||| |||||
RBAM_024780__ 1193 TCAAAACTGGCCTAATTTTTGTTTTGGCGACCAGGCCTTC-CTTGGGCAT 1241
BSNT_04014___ 1242 TATGGGCGCGGCATTAGCCATTGTGACAGGCATGGTGCTCGTCACGCTAT 1291
.||||||||.|||.|.||.|||||.||.||.|||||.||.|||||.||..
RBAM_024780__ 1242 CATGGGCGCCGCACTTGCGATTGTAACGGGGATGGTCCTTGTCACCCTGC 1291
BSNT_04014___ 1292 TGCACGCAGCAACCGTAAGCAAAGTGCTGCCGATCAGCATCAAAATCAAG 1341
||||.||.||.|||||||||||.|||||.|||||||||||.|||||.||.
RBAM_024780__ 1292 TGCATGCGGCCACCGTAAGCAAGGTGCTTCCGATCAGCATTAAAATAAAA 1341
BSNT_04014___ 1342 GAGTACGCGCTCAGCTTCGCTGTTATTGTAATTTGCGGATTCATCAGCTC 1391
||.|||||||||.|.||.||.||.||..|.||||||||.|...|||| |
RBAM_024780__ 1342 GAATACGCGCTCTGTTTTGCCGTCATATTCATTTGCGGCTATGTCAG--C 1389
BSNT_04014___ 1392 CGC--CATCAAACA------TTATATAAGCTTTGGAGCATCTGAGGCTGT 1433
||| ||||||||| |.|| |||..||..||.||||||||
RBAM_024780__ 1390 CGCATCATCAAACACGCCGTTCAT------TTTTCAGGGTCAGAGGCTGT 1433
BSNT_04014___ 1434 CAATCTAGCCGGATGGATTGCGGTGAGCGCCGCCATT---TATATGATC- 1479
.|||||..|.||.||||||||..||| ||||.||| ||||| |.|
RBAM_024780__ 1434 TAATCTCACAGGCTGGATTGCAATGA---CCGCGATTTTGTATAT-AGCG 1479
BSNT_04014___ 1480 CTCCTGCTCGTT-TTCCGTTTAATTAAAAAAGATGAGCTTCGCCGCATTC 1528
||.||.|| ||| |||.|..|.|||||||..||.|||||...|||.||||
RBAM_024780__ 1480 CTTCTTCT-GTTATTCAGGCTGATTAAAAGGGAAGAGCTGATCCGGATTC 1528
BSNT_04014___ 1529 CCATTATCG----------GACGTC--TGATCATCCGATAA 1557
|..|.|||| |||| | |||
RBAM_024780__ 1529 CGGTCATCGGCAAGTTCGTGACG-CGGTGA----------- 1557
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