Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04097 and RBAM_025250

See Amino acid alignment / Visit BSNT_04097 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:27
# Commandline: needle
#    -asequence dna-align/BSNT_04097___engB.1.9828.seq
#    -bsequence dna-align/RBAM_025250___engB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04097___engB-RBAM_025250___engB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04097___engB-RBAM_025250___engB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04097___engB
# 2: RBAM_025250___engB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 592
# Identity:     489/592 (82.6%)
# Similarity:   489/592 (82.6%)
# Gaps:           8/592 ( 1.4%)
# Score: 2004.0
# 
#
#=======================================

BSNT_04097___      1 ATGAAAGTCACAAAGTCAGAAATCGTGATCAGTGCAGTAAAACCGGAACA     50
                     ||||||||||||||||||||||||||||||||.||.||.|||||.|||||
RBAM_025250__      1 ATGAAAGTCACAAAGTCAGAAATCGTGATCAGCGCGGTCAAACCCGAACA     50

BSNT_04097___     51 GTACCCTGAAGGGGGGCTTCCGGAAATCGCATTGGCCGGAAGATCGAACG    100
                     |||||||||.||||||||||||||||||||..||||.||||||||.||.|
RBAM_025250__     51 GTACCCTGATGGGGGGCTTCCGGAAATCGCGCTGGCGGGAAGATCAAATG    100

BSNT_04097___    101 TAGGAAAATCGTCTTTTATCAATTCATTAATCAATCGCAAAAATCTT-GC    149
                     |||||||.||.||||||||||||||||||||||||||.||||| ||| ||
RBAM_025250__    101 TAGGAAAGTCATCTTTTATCAATTCATTAATCAATCGGAAAAA-CTTGGC    149

BSNT_04097___    150 GAGAACGTCATCAAAGCCGGGAAAAACACAAACGCTTAATTTCTACATTA    199
                     .||||||||||||||.|||||.||||||||.||.||.||.||.|||||.|
RBAM_025250__    150 CAGAACGTCATCAAAACCGGGGAAAACACAGACCCTAAACTTTTACATCA    199

BSNT_04097___    200 TCAATGATGAGCTGCATTTTGTGGATGTGCCGGGCTACGGTTTTGCCAAA    249
                     ||||||||||..||||||||||.||.||.||.||.|||||.|||||.|||
RBAM_025250__    200 TCAATGATGAATTGCATTTTGTCGACGTTCCCGGGTACGGATTTGCGAAA    249

BSNT_04097___    250 GTGTC--AAAGTCTGAGCGTGAAGCATGGGGCAGAATGATTGAAACCTAT    297
                     ||.||  ||||  .|||||.|||||||||||.||||||||||||||||||
RBAM_025250__    250 GTTTCCAAAAG--CGAGCGGGAAGCATGGGGGAGAATGATTGAAACCTAT    297

BSNT_04097___    298 ATCACGACACGCGAGGAATTAAAAG-CTGTGGTGCAGATCGTTGATTTGC    346
                     ||.|||||.|||||.||..|.|||| ||| .||||||||.||.||..|..
RBAM_025250__    298 ATGACGACCCGCGAAGAGCTGAAAGCCTG-CGTGCAGATTGTCGACCTCA    346

BSNT_04097___    347 GGCATGCGCCATCTAATGATGATGTACAGATGTATGAATTTTTAAAGTAT    396
                     ||||.|||||.|||..|||.||.||..|.|||||||||||..|.||||||
RBAM_025250__    347 GGCACGCGCCGTCTGCTGAAGACGTGAACATGTATGAATTCCTGAAGTAT    396

BSNT_04097___    397 TACGGCATTCCTGTTATTGTTATCGCTACAAAGGCGGATAAGATCCCGAA    446
                     |||||||||||.||.||.||||||||.|||||.|||||||||||.||.||
RBAM_025250__    397 TACGGCATTCCCGTCATCGTTATCGCGACAAAAGCGGATAAGATTCCAAA    446

BSNT_04097___    447 AGGCAAATGGGACAAACACGCGAAGGTTGTCCGACAAACATTAAATATTG    496
                     |||.|||||||||||.|||...|||||||||..|||.||..|..||||.|
RBAM_025250__    447 AGGAAAATGGGACAAGCACTTAAAGGTTGTCAAACAGACGCTTGATATGG    496

BSNT_04097___    497 ATCCGGAAGACGAGCTAATTCTCTTTTCCTCAGAAACGAAAAAGGGAAAA    546
                     ||||.|||||.|||||.|||.|.||||||||.|||||||||||.||.|||
RBAM_025250__    497 ATCCTGAAGATGAGCTGATTTTATTTTCCTCTGAAACGAAAAAAGGCAAA    546

BSNT_04097___    547 GACGAAGCTTGGGGAGCGATCAAAAAAATGATAAACCGGTAG    588
                     ||.|||||.||||||||.||.|||||||||||.|.||||||.
RBAM_025250__    547 GATGAAGCATGGGGAGCCATAAAAAAAATGATCAGCCGGTAA    588


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