Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04102 and RBAM_025290
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:28
# Commandline: needle
# -asequence dna-align/BSNT_04102___tig.1.9828.seq
# -bsequence dna-align/RBAM_025290___tig.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04102___tig-RBAM_025290___tig.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04102___tig-RBAM_025290___tig.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04102___tig
# 2: RBAM_025290___tig
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1275
# Identity: 1151/1275 (90.3%)
# Similarity: 1151/1275 (90.3%)
# Gaps: 0/1275 ( 0.0%)
# Score: 5259.0
#
#
#=======================================
BSNT_04102___ 1 ATGTCTGTAAAATGGGAAAAACAAGAAGGCAACGAAGGCGTTTTAACGGT 50
|||||||||||||||||||||||||||||||||||||||||.||||||||
RBAM_025290__ 1 ATGTCTGTAAAATGGGAAAAACAAGAAGGCAACGAAGGCGTATTAACGGT 50
BSNT_04102___ 51 TGAAGTTGATGCTGAAACGTTTAAAACAGCACTTGATGATGCATTTAAAA 100
||||||||||||.||.||||||||||||||.|||||||||||||||||||
RBAM_025290__ 51 TGAAGTTGATGCGGATACGTTTAAAACAGCTCTTGATGATGCATTTAAAA 100
BSNT_04102___ 101 AAGTAGTAAAACAAGTTTCAATTCCTGGATTCCGTAAAGGTAAAATTCCT 150
|||||||||||||.|||||.||||||||||||||.|||||.|||.||||.
RBAM_025290__ 101 AAGTAGTAAAACAGGTTTCTATTCCTGGATTCCGCAAAGGGAAAGTTCCC 150
BSNT_04102___ 151 CGCGGATTATTCGAACAGCGCTTTGGCGTAGAAGCTCTTTACCAAGATGC 200
|||||.||||||||||||||.||.|||||.||||||||||||||.|||||
RBAM_025290__ 151 CGCGGTTTATTCGAACAGCGTTTCGGCGTTGAAGCTCTTTACCAGGATGC 200
BSNT_04102___ 201 TTTGGATATTCTTCTTCCTGTAGAATACCCTAAAGCGGTTGAAGAAGCTG 250
|||.||||||.|.|||||||||||||||||||||||||||||||||||.|
RBAM_025290__ 201 TTTAGATATTTTACTTCCTGTAGAATACCCTAAAGCGGTTGAAGAAGCCG 250
BSNT_04102___ 251 GAATCGAGCCTGTAGACCGTCCTGAAATCGATGTTGAAAAAATCGAAAAA 300
|.||.||||||||||||||.||||||||||||||||||||||||||||||
RBAM_025290__ 251 GCATTGAGCCTGTAGACCGCCCTGAAATCGATGTTGAAAAAATCGAAAAA 300
BSNT_04102___ 301 GGCGAAAGCTTAATCTTCACTGCGAAAGTAACAGTAAAACCTGAAGTGAA 350
|||||||||||.||.||||||||.|||||.||.||||||||.||||||||
RBAM_025290__ 301 GGCGAAAGCTTGATTTTCACTGCAAAAGTGACTGTAAAACCGGAAGTGAA 350
BSNT_04102___ 351 GCTTGGCGACTACAAAGGCTTAGGCATTGAAAAAGACGACACAACTGTAA 400
.|||||||||||||||||||||||.||.||||||||.|||||..|.||.|
RBAM_025290__ 351 ACTTGGCGACTACAAAGGCTTAGGAATCGAAAAAGATGACACTGCCGTTA 400
BSNT_04102___ 401 CTGACGAAGATGTTCAAAACGAACTAAAAGCGCTTCAAGAGCGTCAAGCT 450
|||||||||||||.|||||||||||.|||||.||||||||||||||.|||
RBAM_025290__ 401 CTGACGAAGATGTACAAAACGAACTTAAAGCTCTTCAAGAGCGTCAGGCT 450
BSNT_04102___ 451 GAGCTTGTTGTAAAAGAAGAAGGCGCCGTTGAAGAAGGAAACACAGTTGT 500
||||||||.||.||||||||||||||.||||||.|.||..|.|||||.||
RBAM_025290__ 451 GAGCTTGTCGTGAAAGAAGAAGGCGCTGTTGAAAACGGGGATACAGTCGT 500
BSNT_04102___ 501 TCTTGATTTCGAAGGATTCGTTGACGGCGAAGCTTTCGAAGGCGGAAAAG 550
||||||.||||||||.|||||||||||||||||.||.|||||||||||||
RBAM_025290__ 501 TCTTGACTTCGAAGGTTTCGTTGACGGCGAAGCGTTTGAAGGCGGAAAAG 550
BSNT_04102___ 551 CTGAAAACTACTCTCTAGAAGTAGGTTCTGGTTCATTCATCCCTGGCTTC 600
||||.||||||||.||.||||||||.||.||||||||||||||.||||||
RBAM_025290__ 551 CTGAGAACTACTCACTTGAAGTAGGATCAGGTTCATTCATCCCGGGCTTC 600
BSNT_04102___ 601 GAAGATCAATTAGTTGGCCTTGAAGCAGGTGCTGAGAAGGATGTTGAAGT 650
|||||.||.|||...||||||||||||||.|||||.||||||||||||||
RBAM_025290__ 601 GAAGAGCAGTTAACAGGCCTTGAAGCAGGCGCTGAAAAGGATGTTGAAGT 650
BSNT_04102___ 651 GACATTCCCTGAGGAGTACCACGCTGAAGATCTTGCAGGCAAACCAGCTG 700
.|||||||||||.|||||||||||||||||.|||||.||.||||||||||
RBAM_025290__ 651 AACATTCCCTGAAGAGTACCACGCTGAAGAGCTTGCCGGAAAACCAGCTG 700
BSNT_04102___ 701 TGTTTAAAGTGAAAATTCACGAAATCAAAGCGAAAGAGCTTCCTGAGCTT 750
|.||.||||||||||||||.||||||||||||||||||||||||||||||
RBAM_025290__ 701 TTTTCAAAGTGAAAATTCATGAAATCAAAGCGAAAGAGCTTCCTGAGCTT 750
BSNT_04102___ 751 GACGATGAATTCGCAAAAGATATCGATGAAGAAGTGGAAACACTTGCTGA 800
.||||.||||||||||||||.||.||.||||||||.|||||.||||||||
RBAM_025290__ 751 AACGACGAATTCGCAAAAGACATTGACGAAGAAGTTGAAACGCTTGCTGA 800
BSNT_04102___ 801 ATTAACTGAAAAAACAAAGAAACGTTTAGAAGAAGCAAAAGAAAACGAAG 850
|||||||||.||||||||.|||||..|.||||||||||||||||||||||
RBAM_025290__ 801 ATTAACTGAGAAAACAAAAAAACGCCTTGAAGAAGCAAAAGAAAACGAAG 850
BSNT_04102___ 851 CTGACGCTAAATTGCGTGAAGAGCTTGTTCTGAAAGCTTCTGAAAATGCT 900
|||||||||||||||||||||||||||||||||||||.||||||||.|||
RBAM_025290__ 851 CTGACGCTAAATTGCGTGAAGAGCTTGTTCTGAAAGCATCTGAAAACGCT 900
BSNT_04102___ 901 GAAATTGATGTGCCTCAAGCAATGGTCGACACTGAGCTTGACCGCATGCT 950
|||..||||||.||.|||||.|||.|||||||||||||||||||||||||
RBAM_025290__ 901 GAAGCTGATGTTCCACAAGCGATGATCGACACTGAGCTTGACCGCATGCT 950
BSNT_04102___ 951 GAAAGAATTCGAACAGCGTCTGCAAATGCAAGGCATGAACCTTGAGCTTT 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025290__ 951 GAAAGAATTCGAACAGCGTCTGCAAATGCAAGGCATGAACCTTGAGCTTT 1000
BSNT_04102___ 1001 ACACTCAATTCTCAGGCCAAGATGAAGCTGCGCTTAAAGAGCAAATGAAA 1050
||||||||||||||||||||||.|||...|||.|.|||||||||||||||
RBAM_025290__ 1001 ACACTCAATTCTCAGGCCAAGACGAAAACGCGTTAAAAGAGCAAATGAAA 1050
BSNT_04102___ 1051 GAAGATGCTGAAAAACGCGTAAAATCTAACCTGACTCTTGAGGCGATTGC 1100
||||||||.|.|||||||||||||||.||||||||||||||.|||||.||
RBAM_025290__ 1051 GAAGATGCCGCAAAACGCGTAAAATCAAACCTGACTCTTGAAGCGATCGC 1100
BSNT_04102___ 1101 GAAAGCGGAAAACCTTGAAGTATCAGATGAGGAAGTTGATGCTGAGCTTA 1150
..||||.|||||||||||||||.|.||.||.||||||||.||||||||.|
RBAM_025290__ 1101 TCAAGCTGAAAACCTTGAAGTAACGGACGAAGAAGTTGAAGCTGAGCTGA 1150
BSNT_04102___ 1151 CAAAAATGGCTGAAGCATACAACATGCCTGTTGAAAATATTAAACAAGCC 1200
|.||||||||||||||.|||||||||||.||||||||.||.||.||.||.
RBAM_025290__ 1151 CTAAAATGGCTGAAGCTTACAACATGCCGGTTGAAAACATCAAGCAGGCA 1200
BSNT_04102___ 1201 ATCGGTTCTACTGACGCGATGAAAGAAGATTTAAAAGTTCGCAAAGCAAT 1250
||||||||.||||||||||||||||||||||||||||||||.||||||||
RBAM_025290__ 1201 ATCGGTTCAACTGACGCGATGAAAGAAGATTTAAAAGTTCGAAAAGCAAT 1250
BSNT_04102___ 1251 TGATTTTCTTGTAGAAAACCGTTAA 1275
|||||||||||||||||||||||||
RBAM_025290__ 1251 TGATTTTCTTGTAGAAAACCGTTAA 1275
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