Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04150 and RBAM_025520
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:32
# Commandline: needle
# -asequence dna-align/BSNT_04150___sdhC.1.9828.seq
# -bsequence dna-align/RBAM_025520___sdhC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04150___sdhC-RBAM_025520___sdhC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04150___sdhC-RBAM_025520___sdhC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04150___sdhC
# 2: RBAM_025520___sdhC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 613
# Identity: 520/613 (84.8%)
# Similarity: 520/613 (84.8%)
# Gaps: 8/613 ( 1.3%)
# Score: 2227.5
#
#
#=======================================
BSNT_04150___ 1 ATGTCTGGGAACAGAGAGTTTTATTTTCGAAGATTGCATTCCTTGCTTGG 50
|||||||||||||||||||||||||||||||||||||||||||||||.||
RBAM_025520__ 1 ATGTCTGGGAACAGAGAGTTTTATTTTCGAAGATTGCATTCCTTGCTCGG 50
BSNT_04150___ 51 CGTCATACCGGTCGGCATCTTTCTCATTCAGCATTTAGTCGTCAACCAGT 100
.||.||.|||||||||||||||.|.||.||||||||||||||||||||.|
RBAM_025520__ 51 TGTTATTCCGGTCGGCATCTTTTTGATCCAGCATTTAGTCGTCAACCAAT 100
BSNT_04150___ 101 TTGCCGCAAGGGGCGCTGAAGCATTCAATA--GCG--CTGCTCATTTTAT 146
|||||||||||||.||.||.||.||.||.| ||| |.|| |||||
RBAM_025520__ 101 TTGCCGCAAGGGGAGCGGATGCGTTTAACAAGGCGGCCGGC----TTTAT 146
BSNT_04150___ 147 GGATAGTCTGCCTTTCAGGTATGCCTTGGAAATTTTTATTATCTTCTTAC 196
|||.||||||||.|||||||||||.||.||||||||||||||.|||||||
RBAM_025520__ 147 GGACAGTCTGCCGTTCAGGTATGCGTTAGAAATTTTTATTATTTTCTTAC 196
BSNT_04150___ 197 CATTAATTTATCATGCAGTTTATGGTGTGTACATAGCGTTTACTGCGAAA 246
|.||||||||||||||.|||||.||||||||||||||.||||||||||||
RBAM_025520__ 197 CTTTAATTTATCATGCGGTTTACGGTGTGTACATAGCATTTACTGCGAAA 246
BSNT_04150___ 247 AATAACGCAGGCCAATACAGCTACATGAGAAACTGGCTATTCGTCCTGCA 296
||.|||||.|||||.|||||.||..|.|||||||||.|.||.||.||.||
RBAM_025520__ 247 AACAACGCTGGCCACTACAGTTATTTCAGAAACTGGATGTTTGTGCTTCA 296
BSNT_04150___ 297 GCGTGTAACCGGTATCATCACCCTCATTTTCGTCAGCTGGCACGTGTGGG 346
.|||||.||.|||||..|||||||.|||||||||||||||||.||||||.
RBAM_025520__ 297 ACGTGTCACTGGTATTCTCACCCTTATTTTCGTCAGCTGGCATGTGTGGC 346
BSNT_04150___ 347 AAACCCGCATTGCTGCACAAATGGGCGCTGAGGTCAATTTCGACATGATG 396
|.||.||.|||||.||.||.|||||||||||.|||||.|||||.||||||
RBAM_025520__ 347 AGACGCGGATTGCCGCGCAGATGGGCGCTGAAGTCAACTTCGATATGATG 396
BSNT_04150___ 397 GCGAATATTTTGAGCTCTCCGGCTATGCTTGGTTTTTACATTGTCGGTGT 446
|||||||||||||||||.|||..||||||.||.|||||||||||.||.||
RBAM_025520__ 397 GCGAATATTTTGAGCTCGCCGTTTATGCTCGGCTTTTACATTGTAGGCGT 446
BSNT_04150___ 447 TTTATCAACAATTTTCCACTTCTCGAACGGTTTATGGTCTTTCGCTGTTA 496
||||||....|||||.|||||.||.|||||.|||||||||||.||.||.|
RBAM_025520__ 447 TTTATCGGTCATTTTTCACTTTTCAAACGGCTTATGGTCTTTTGCGGTCA 496
BSNT_04150___ 497 CATGGGGCATCACGGTAACGCCTCGTTCTCAAAGAATTTCGACATACGTT 546
|||||||.||||||||.|||||.||||||||||||||||||||.|||||.
RBAM_025520__ 497 CATGGGGGATCACGGTCACGCCGCGTTCTCAAAGAATTTCGACTTACGTG 546
BSNT_04150___ 547 ACGCTGATTATTTTTGTTGCACTGTCATACGTAGGCTTAAAAGCGATTTT 596
|||||||||||.|||.|.||.||.|||||||||||.||||||||||||||
RBAM_025520__ 547 ACGCTGATTATATTTTTAGCGCTTTCATACGTAGGTTTAAAAGCGATTTT 596
BSNT_04150___ 597 CGCATTTGTTTAA 609
.||.|||||.|||
RBAM_025520__ 597 TGCGTTTGTGTAA 609
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