Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04170 and RBAM_025640
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:33
# Commandline: needle
# -asequence dna-align/BSNT_04170___yshE.1.9828.seq
# -bsequence dna-align/RBAM_025640___yshE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04170___yshE-RBAM_025640___yshE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04170___yshE-RBAM_025640___yshE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04170___yshE
# 2: RBAM_025640___yshE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 405
# Identity: 343/405 (84.7%)
# Similarity: 343/405 (84.7%)
# Gaps: 0/405 ( 0.0%)
# Score: 1467.0
#
#
#=======================================
BSNT_04170___ 1 ATGAGTGATTTTTGGGAAAACGAGCTTGTGGAAATCGCGGCATATTACAG 50
||||.||.||||||||||||.||||||||.|||||||||||.||||||||
RBAM_025640__ 1 ATGAATGCTTTTTGGGAAAATGAGCTTGTTGAAATCGCGGCTTATTACAG 50
BSNT_04170___ 51 TGTCGCGGTTCTCTGCCTCGTCCTCTTTTTGACTGTGTTTGAGCTGGTGA 100
|||.||.||..|.||.||||||.|.|||.||||.||||||||..||||||
RBAM_025640__ 51 TGTAGCCGTCTTGTGTCTCGTCATTTTTCTGACCGTGTTTGAATTGGTGA 100
BSNT_04170___ 101 CGGCTTATAAAAACTGGGAAGAGATTCAAAAAGGAAATCTTGCGGTGGCA 150
|..|.|||||||||||||..||.||.||||||||.|||||||||||||||
RBAM_025640__ 101 CATCCTATAAAAACTGGGTGGAAATCCAAAAAGGCAATCTTGCGGTGGCA 150
BSNT_04170___ 151 ATGGCGACCGGCGGAAAAATTTTGGGAATCGCAAACGTATTTCAGCATTC 200
|||||||||||.||.||||||.|.||.||||||||.||.||||||||...
RBAM_025640__ 151 ATGGCGACCGGAGGGAAAATTCTCGGTATCGCAAATGTCTTTCAGCACAG 200
BSNT_04170___ 201 CATCTCCCAGCATAATTCGCTGCTGCAAATGATCGGCTGGGGCGTTTACG 250
||||.||||||||||||||||..||||||||||||||||||||||.||||
RBAM_025640__ 201 CATCGCCCAGCATAATTCGCTTTTGCAAATGATCGGCTGGGGCGTATACG 250
BSNT_04170___ 251 GGTTTGTTATGCTTCTGATCAGCTACTTTATTTTTGAGTTTTTGACTCCG 300
|.|||.||||||||.|.||||||||.|||||.|||||.|||.||||.||.
RBAM_025640__ 251 GATTTATTATGCTTTTAATCAGCTATTTTATCTTTGAATTTCTGACGCCC 300
BSNT_04170___ 301 CGGTTTAAAATTGATCAGGAAATCGAAAATGATAACCGGGCTGTCGGCTT 350
|||||||||||||||.|.|||||.|||||.||||||.|.|||||||||||
RBAM_025640__ 301 CGGTTTAAAATTGATAAAGAAATTGAAAAAGATAACAGAGCTGTCGGCTT 350
BSNT_04170___ 351 TATTTCATTTGTCATTTCTGTCGGGCTTTCATTTGTGGTGGCAGCCGGAA 400
|||||||||||||||.||.|||||.||.||||||||||||||.|||||.|
RBAM_025640__ 351 TATTTCATTTGTCATCTCAGTCGGCCTGTCATTTGTGGTGGCCGCCGGGA 400
BSNT_04170___ 401 TATAA 405
|.|||
RBAM_025640__ 401 TTTAA 405
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