Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04196 and RBAM_025800

See Amino acid alignment / Visit BSNT_04196 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:36
# Commandline: needle
#    -asequence dna-align/BSNT_04196___araP.1.9828.seq
#    -bsequence dna-align/RBAM_025800___araP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04196___araP-RBAM_025800___araP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04196___araP-RBAM_025800___araP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04196___araP
# 2: RBAM_025800___araP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 946
# Identity:     733/946 (77.5%)
# Similarity:   733/946 (77.5%)
# Gaps:           8/946 ( 0.8%)
# Score: 2784.0
# 
#
#=======================================

BSNT_04196___      1 ATGAAACCTGTGAAAACGGGAACGGTTCATCCCGTTCCTTCAGCTGCGAA     50
                     ||||.||||||.||.||.|..||.|..||..|||||.||.||| |.||.|
RBAM_025800__      1 ATGAGACCTGTAAAGACAGAGACAGCGCAAACCGTTTCTGCAG-TCCGGA     49

BSNT_04196___     51 ACAATCAG-GCTGGCGAGATGTATTTTATTCGAAAAAAGCGGCGCCCTAT     99
                     |.||.|.| ||.||||..||||..|.|||||.||||||||||||||.|||
RBAM_025800__     50 AGAAGCCGCGCCGGCGCAATGTGCTGTATTCAAAAAAAGCGGCGCCTTAT     99

BSNT_04196___    100 CTGTTTACAGCGCCATTCGTTTTATCCTTTCTCGTATTTTTTCTATACCC    149
                     ||.|||||.||||||||..|..|.||.||||||||.||.|||.|.||.||
RBAM_025800__    100 CTTTTTACGGCGCCATTTATCATTTCGTTTCTCGTTTTCTTTTTGTATCC    149

BSNT_04196___    150 CATCATTAGTGTCTTCATCATGAGCTTTCAAAGAATATTGCCGGGAGAGG    199
                     .||.||.||.||.||.|||||||||||||||.|.|||.||||||||||..
RBAM_025800__    150 GATTATCAGCGTGTTTATCATGAGCTTTCAACGGATACTGCCGGGAGAAA    199

BSNT_04196___    200 TGTCCTTTGTCGGTTTGTCTAATTATACAGCGCTAAACAACCCGACGTTC    249
                     |..|.||||||||.||.||.||||||||.||.||....||.||.||.||.
RBAM_025800__    200 TTACATTTGTCGGGTTTTCCAATTATACCGCTCTTCTTAATCCAACCTTT    249

BSNT_04196___    250 TATACCGCCCTTTGGAATACGCTGGAATACACCTTTTGGACGCTGATCGT    299
                     |||||.||..|.|..||.||..|||||||.|||||.||||||||||||||
RBAM_025800__    250 TATACGGCATTATTTAACACATTGGAATATACCTTCTGGACGCTGATCGT    299

BSNT_04196___    300 GCTGATTCCTGTCCCATTGCTTCTGGCCAT-ATTCCTGAATTCAAAGCTG    348
                     |||||||||.||.||..|.|||.||||..| ||| ||||||||.|||||.
RBAM_025800__    300 GCTGATTCCGGTGCCGCTTCTTTTGGCGGTGATT-CTGAATTCGAAGCTC    348

BSNT_04196___    349 GTCAAATTTAGAAATATATTTAAATCAGCACTATTTATCCCGGCATTGAC    398
                     ||||..||.||||||.|.||||||||.||.||.|||.|.|||||.||.||
RBAM_025800__    349 GTCAGGTTCAGAAATGTGTTTAAATCGGCTCTGTTTGTACCGGCTTTAAC    398

BSNT_04196___    399 CTCAACCATTGTCGCGGGGATCATTTTTCGGCTGATCTTCGGAGAAATGG    448
                     .||.||.||.||.||||||||.|||||.||.|||||.||||||||||||.
RBAM_025800__    399 ATCGACGATCGTAGCGGGGATTATTTTCCGTCTGATGTTCGGAGAAATGA    448

BSNT_04196___    449 AAACGTCTCTGGCCAATTCCA--TCCTACTCAAACTCGGCTTTTCACCTC    496
                     |.|||||.||.||.||  |.|  |..|..|.||.||.|||...|||||.|
RBAM_025800__    449 ATACGTCGCTTGCAAA--CGAGCTGATGATGAAGCTTGGCGCATCACCCC    496

BSNT_04196___    497 AGAACTGGATGAACAATGAACATACCGGCATGTTTTTGATGGTGCTGCTT    546
                     |.||||||.|.|||||..||..|||||||||||||||.||||||||||||
RBAM_025800__    497 AAAACTGGCTCAACAACAAAGGTACCGGCATGTTTTTAATGGTGCTGCTT    546

BSNT_04196___    547 GCTTCATGGAGATGGATGGGAATCAACATCCTTTACTTTTTAGCCGGTTT    596
                     ||.||||||||.||||||||.||.|||||.|||||||||.|.||.||.||
RBAM_025800__    547 GCGTCATGGAGGTGGATGGGGATTAACATTCTTTACTTTCTGGCGGGATT    596

BSNT_04196___    597 GCAAAATGTGCCGAAAGAGCTGTACGAAGCCGCTGATATAGACGGCGCGA    646
                     ||||||.|||||||||||..||||.|||||.|||||.||.|||||.||||
RBAM_025800__    597 GCAAAACGTGCCGAAAGAATTGTATGAAGCGGCTGAAATTGACGGGGCGA    646

BSNT_04196___    647 ATACAATGAAAAAATTTCTGCACATCACGCTGCCGTTTCTCAAGCCTGTA    696
                     .|||...||||||.||.|.|||.||.||.||.||.|||.|.|||||.||.
RBAM_025800__    647 GTACGTGGAAAAAGTTCCGGCATATTACCCTTCCATTTTTAAAGCCGGTG    696

BSNT_04196___    697 ACCGTATATGTGCTGACCATCAGCATTATCGGCGGCTTCAGGATGTTTGA    746
                     .||||.||||||.|.||.|||||.|||||||||||.|||||.||||||||
RBAM_025800__    697 TCCGTTTATGTGTTAACGATCAGTATTATCGGCGGTTTCAGAATGTTTGA    746

BSNT_04196___    747 GGAAAGCTACGTCCTTTGGCAGAATAATTCCCCGGGTAATATTGGTCTGA    796
                     |||||||||.||.|||||||||||||||||||||||.|||||.||.||.|
RBAM_025800__    747 GGAAAGCTATGTGCTTTGGCAGAATAATTCCCCGGGCAATATCGGCCTCA    796

BSNT_04196___    797 CGCTTGTTGGATATTTGTATCAGCAGGGGCTTGCCTACAACGAAATGGGG    846
                     |||||||.||.|||||.|||||||||||||||||.|||||||||||||||
RBAM_025800__    797 CGCTTGTCGGTTATTTATATCAGCAGGGGCTTGCATACAACGAAATGGGG    846

BSNT_04196___    847 TACGGAGCAGCCATCGGCATCGTGCTTTTGATTGTGATCCTTGTTGTCAG    896
                     |||||.||.||.|||||.||.||.||||||.||||.|||.|..|.|||||
RBAM_025800__    847 TACGGGGCCGCAATCGGAATTGTCCTTTTGCTTGTCATCTTACTAGTCAG    896

BSNT_04196___    897 CCTGATTTCATTAAAGCTGTCAGGCTCGTTTAAGGGGGAGGGATAA    942
                     .||..|||||.|.||.|||||.||.||||||||.||||||||||||
RBAM_025800__    897 TCTTGTTTCACTGAAACTGTCCGGTTCGTTTAAAGGGGAGGGATAA    942


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