Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04224 and RBAM_025990
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:38
# Commandline: needle
# -asequence dna-align/BSNT_04224___thrS.1.9828.seq
# -bsequence dna-align/RBAM_025990___thrS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04224___thrS-RBAM_025990___thrS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04224___thrS-RBAM_025990___thrS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04224___thrS
# 2: RBAM_025990___thrS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1937
# Identity: 1642/1937 (84.8%)
# Similarity: 1642/1937 (84.8%)
# Gaps: 10/1937 ( 0.5%)
# Score: 6970.0
#
#
#=======================================
BSNT_04224___ 1 ATGTCAGATATGGTAAAAATCACATTTCCTGATGGAGCAGTCAAGGAGTT 50
||||||||||||.|.||.|||||||||||.||.|||||.||.|||||.||
RBAM_025990__ 1 ATGTCAGATATGATCAACATCACATTTCCGGACGGAGCGGTAAAGGAATT 50
BSNT_04224___ 51 TGCGAAAGGAACAACAACAGAAGATATCGCGGCATCCATCAGTCCGGGAT 100
|.||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_025990__ 51 TCCGAAAGGAACAACAACAGAAGATATCGCGGCATCCATCAGTCCGGGAT 100
BSNT_04224___ 101 TAAAGAAAAAATCATTAGCCGGAAAACTGAACGGAAAAGAAATCGATTTG 150
||||||||||.||.|||||||||||||||||||||.|.|||||.|||||.
RBAM_025990__ 101 TAAAGAAAAAGTCTTTAGCCGGAAAACTGAACGGACAGGAAATTGATTTA 150
BSNT_04224___ 151 AGAACGCCGA-TCAATGAAGACGGTACAGTGGAAATCATTACAGAAGGCT 199
|||||.|||| |||| ||.||.|||.|.||.||||||||||||||||||.
RBAM_025990__ 151 AGAACACCGATTCAA-GAGGATGGTGCCGTAGAAATCATTACAGAAGGCA 199
BSNT_04224___ 200 CAGAAGAAGGTCTTCAA-ATTATGCGCCACAGTACGGCTCACTTGCTGGC 248
||||||||||| ||.|| ||.|||||.|||||.|||||.||.||..||||
RBAM_025990__ 200 CAGAAGAAGGT-TTGAACATCATGCGGCACAGCACGGCGCATTTATTGGC 248
BSNT_04224___ 249 TCAAGCGATTAAACGCATCTACAAGGATGTTAAATTCGGCGTCGGTCCGG 298
.||.||||||||||||||.||.||.|||||.||||||||.||||||||.|
RBAM_025990__ 249 CCAGGCGATTAAACGCATTTATAAAGATGTGAAATTCGGTGTCGGTCCCG 298
BSNT_04224___ 299 TTATCGAAAACGGTTTTTACTACGATGTAGAAATGGACGAAGCGATTACA 348
|.||.||||||||.||.||.||.||.||.||||||||..|.|||.|.||.
RBAM_025990__ 299 TCATTGAAAACGGGTTCTATTATGACGTTGAAATGGAGCAGGCGCTGACG 348
BSNT_04224___ 349 CCGGAGGATCTGCCGAAAATCGAGAAAGAAATGAAAAAAATCGTTAATGC 398
|||||.||.||.|||||.||.||.||||||||||||...|||||...||.
RBAM_025990__ 349 CCGGATGACCTTCCGAAGATTGAAAAAGAAATGAAACGCATCGTCGGTGA 398
BSNT_04224___ 399 GAACCTGCCGATCGTTCGAAAAGAAGTCAGCCGTGAAGAAGCGAAAGCCC 448
.||.||||||||..|.|||||||||||.||||||||.|||||.||||||.
RBAM_025990__ 399 AAATCTGCCGATTATCCGAAAAGAAGTGAGCCGTGATGAAGCAAAAGCCA 448
BSNT_04224___ 449 GTTTTGCGGAAATCGGCGACGACCTGAAGCTTGAACTATTGGATGCGATT 498
..|||||||||||||||||..|.||||||||||||||..|||||||.||.
RBAM_025990__ 449 TGTTTGCGGAAATCGGCGATAATCTGAAGCTTGAACTGCTGGATGCCATC 498
BSNT_04224___ 499 CCTGAAGGAGAAACCGTTTCGATCTATGAGCAAGGCGAATTCTTTGACCT 548
|||||||..|||||.||.||.||.||||||||.||||||||.||||||||
RBAM_025990__ 499 CCTGAAGACGAAACGGTCTCCATTTATGAGCAGGGCGAATTTTTTGACCT 548
BSNT_04224___ 549 GTGCCGCGGTGTCCATGTTCCTTCAACCGGAAAAATCAAAGAGTTTAAGC 598
|||||||||.||.||.||.||.||.||.||.|||||.|||||.|||||||
RBAM_025990__ 549 GTGCCGCGGCGTGCACGTGCCGTCTACAGGCAAAATTAAAGAATTTAAGC 598
BSNT_04224___ 599 TGTTAAGCCTTGCAGGCGCATACTGGCGCGGCGACAGCAAAAACCAAATG 648
||.|.||||||||.||||||||||||||||||||||||||||||||||||
RBAM_025990__ 599 TGCTTAGCCTTGCGGGCGCATACTGGCGCGGCGACAGCAAAAACCAAATG 648
BSNT_04224___ 649 CTTCAGCGCGTATATGGTACAGCTTTCTTCAAAAAAGCTGATCTTG-AAG 697
|||||||||.|.||.||.||.||.|||||.|||||.|.||| |||| |||
RBAM_025990__ 649 CTTCAGCGCATTTACGGCACGGCCTTCTTTAAAAAGGATGA-CTTGAAAG 697
BSNT_04224___ 698 AGCATCTTCGTATGCTAGAAGAAGCGAAAGAACGCGACCACAGAAAGCTC 747
|||||.|.||.|||||.||||||||||||||.||.||||||.||||.||.
RBAM_025990__ 698 AGCATTTGCGGATGCTTGAAGAAGCGAAAGAGCGTGACCACCGAAAACTG 747
BSNT_04224___ 748 GGCAAAGAATTAAAGCTGTTTGCGAACTCTCAAAAAGTCGGACAAGGCCT 797
||||||||||||||..||||.||.||||||||||||||||||||||||||
RBAM_025990__ 748 GGCAAAGAATTAAAATTGTTCGCCAACTCTCAAAAAGTCGGACAAGGCCT 797
BSNT_04224___ 798 GCCGCTTTGGCTGCCAAAAGGCGCGACAATCCGCCGCGTCATCGAGCGCT 847
||||||.||||||||.||||||||.||.|||||.|||||.||||||||||
RBAM_025990__ 798 GCCGCTCTGGCTGCCGAAAGGCGCAACCATCCGACGCGTGATCGAGCGCT 847
BSNT_04224___ 848 ACATTGTCGATAAAGAAATCAGCCTCGGCTATGAGCACGTATACACACCT 897
|||||||.||||||||..|.||||||||.|||||||||||.||.||.|||
RBAM_025990__ 848 ACATTGTGGATAAAGAGCTGAGCCTCGGTTATGAGCACGTCTATACGCCT 897
BSNT_04224___ 898 GTGCTAGGCAGCAAAGAGCTGTATGAAACATCAGGACACTGGGACCATTA 947
||.||.||.||||||||.|||||.|||||||||||.||||||||.|||||
RBAM_025990__ 898 GTTCTCGGAAGCAAAGACCTGTACGAAACATCAGGGCACTGGGATCATTA 947
BSNT_04224___ 948 TCAGGA-AGGCATGTTCCCTCCGATGGAAATGGACAATGAAACACTTGTA 996
|||||| |.| ||||||||.||||||||||||||||||||||||||.||.
RBAM_025990__ 948 TCAGGATACG-ATGTTCCCGCCGATGGAAATGGACAATGAAACACTCGTG 996
BSNT_04224___ 997 TTGCGTCCGATGAACTGTCCGCACCATATGATGATTTACAAACAAGACAT 1046
.|.|||||||||||||||||.|||||||||||||||||||||||.|||||
RBAM_025990__ 997 CTCCGTCCGATGAACTGTCCTCACCATATGATGATTTACAAACAGGACAT 1046
BSNT_04224___ 1047 TCACAGTTACCGCGAGCTTCCGATTCGTATTGCGGAGCTTGGAACGATGC 1096
||||||.|||||||||||||||||.||.||.||.|||||.||||||||||
RBAM_025990__ 1047 TCACAGCTACCGCGAGCTTCCGATCCGCATCGCAGAGCTGGGAACGATGC 1096
BSNT_04224___ 1097 ACCGCTATGAAATGTCAGGTGCGCTGTCAGGGCTTCAACGGGTACGCGGA 1146
|.||.|||||||||||.||.|||||.|||||.|||||.||.||||||||.
RBAM_025990__ 1097 ATCGTTATGAAATGTCCGGGGCGCTTTCAGGTCTTCAGCGCGTACGCGGC 1146
BSNT_04224___ 1147 ATGACGTTAAATGATGCACACATCTTTGTGCGCCCGGATCAAATTAAGGA 1196
||||||||||||||.||.|||||.||.||.|||||.||.||.|||||.||
RBAM_025990__ 1147 ATGACGTTAAATGACGCGCACATTTTCGTCCGCCCTGACCAGATTAAAGA 1196
BSNT_04224___ 1197 TGAGTTTATCCGTACAGTCCGTTTAATCCAGGATGTTTATGAAGACTTCG 1246
.||.||.|||||.||.||||||||.||.||.||.||.||.||||||||||
RBAM_025990__ 1197 AGAATTCATCCGCACGGTCCGTTTGATTCAAGACGTATACGAAGACTTCG 1246
BSNT_04224___ 1247 GTTTAAGTGATTACACATTCCGTCTGTCTTACCGCGATCCGGAAGATACA 1296
|..|.|.|||||||||||||||.|||||||||||||||||.||||||||.
RBAM_025990__ 1247 GCCTGAATGATTACACATTCCGCCTGTCTTACCGCGATCCTGAAGATACG 1296
BSNT_04224___ 1297 GAGAAATATTTTGATGACGATGAAATGTGGAACAAAGCGCAATCCATGCT 1346
||.||||||||||||||.|||||.|||||||||||||||||.||||||||
RBAM_025990__ 1297 GAAAAATATTTTGATGATGATGAGATGTGGAACAAAGCGCAGTCCATGCT 1346
BSNT_04224___ 1347 GAAAGAGGCAATGGACGAAATCGGCCACGACTATTACGAAGCAGAAGGTG 1396
|||||.|||||||||.||.||.||.||||||||.||.|||||.|||||.|
RBAM_025990__ 1347 GAAAGCGGCAATGGATGAGATGGGGCACGACTACTATGAAGCGGAAGGCG 1396
BSNT_04224___ 1397 AAGCGGCATTCTACGGCCCTAAACTTGATGTCCAAGTGAAAACTGCGATC 1446
|||||||.||.|||||||||||.|||||.||.||.||||||||.||||||
RBAM_025990__ 1397 AAGCGGCGTTTTACGGCCCTAAGCTTGACGTGCAGGTGAAAACGGCGATC 1446
BSNT_04224___ 1447 GGAAAAGAAGAAACACTGTCTACGGTACAGCTTGA-TTTCTTATTGCCGG 1495
||.||||||||.|||.||||.||.||||||||||| ||.|||.|| ||||
RBAM_025990__ 1447 GGCAAAGAAGAGACATTGTCAACTGTACAGCTTGACTTCCTTCTT-CCGG 1495
BSNT_04224___ 1496 AACGTTTCGACCTGACATACATCGGTGAGGACGGCAAGCAGCACCGTCCG 1545
||||.||.||.||.||.|||.||||.||.||||||||.|||||||||||.
RBAM_025990__ 1496 AACGCTTTGATCTCACTTACGTCGGAGAAGACGGCAAACAGCACCGTCCT 1545
BSNT_04224___ 1546 GTTGTCATTCACAGAGGTGTCGTTTCAACAATGGAACGCTTTGTTGCCTT 1595
||.||.||||||.|.||.|||||.|||||.|||||.||.||.|||||.||
RBAM_025990__ 1546 GTCGTTATTCACCGCGGCGTCGTGTCAACGATGGAGCGTTTCGTTGCTTT 1595
BSNT_04224___ 1596 CTTAATCGAAGAACACAAAGGCGCGCTGCCGACATGGCTTGCACCGGTTC 1645
||||||||||||.|||||||||||.||.||||||||||||||.|||||.|
RBAM_025990__ 1596 CTTAATCGAAGAGCACAAAGGCGCCCTTCCGACATGGCTTGCGCCGGTGC 1645
BSNT_04224___ 1646 AGTTCCAAGTCATTCCGGTTTCTCCGGCTGTGCATTTAGACTACGCGAAA 1695
|.||||||||||||||.||.||.|||.|.||||||.|.||.||.||||||
RBAM_025990__ 1646 AATTCCAAGTCATTCCTGTATCACCGTCCGTGCATCTTGATTATGCGAAA 1695
BSNT_04224___ 1696 AAAGTGCAGGAACGCCTGCAGCGTGAAGGCCTGCGTGTTGAAGTCGACAG 1745
|||||||||||.||||||||||||||||||||||||||.||..|.|||||
RBAM_025990__ 1696 AAAGTGCAGGAGCGCCTGCAGCGTGAAGGCCTGCGTGTCGAGCTTGACAG 1745
BSNT_04224___ 1746 CCGCGATGAAAAAATCGGCTACAAAATCCGTGAAGCGCAAATGCAAAAAA 1795
|||.|||||.|||||||||||.||||||||||||||||||||||||||||
RBAM_025990__ 1746 CCGGGATGAGAAAATCGGCTATAAAATCCGTGAAGCGCAAATGCAAAAAA 1795
BSNT_04224___ 1796 TCCCGTACATGCTGGTGGTCGGTGACCAAGAAGCAGAAAACGGCGCGGTA 1845
|||||||||||||.||||||||||||||||||||.|||||||||||||||
RBAM_025990__ 1796 TCCCGTACATGCTTGTGGTCGGTGACCAAGAAGCGGAAAACGGCGCGGTA 1845
BSNT_04224___ 1846 AACGTGCGTAAATACGGAGAGCAGAACTCTGAAACGATTTCTCTTGATGA 1895
|||||.||.||||||||.||||||||.||.|||||..|.||..|.||.||
RBAM_025990__ 1846 AACGTCCGGAAATACGGCGAGCAGAAATCAGAAACCGTCTCATTGGACGA 1895
BSNT_04224___ 1896 GTTTGTGAAAAAGGCAGTAGCTGAAGCGAAAAAATAA 1932
.||||||||||||||.|||||.|||||||||||||||
RBAM_025990__ 1896 TTTTGTGAAAAAGGCTGTAGCCGAAGCGAAAAAATAA 1932
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