Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04241 and RBAM_026090

See Amino acid alignment / Visit BSNT_04241 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:40
# Commandline: needle
#    -asequence dna-align/BSNT_04241___ytbE.1.9828.seq
#    -bsequence dna-align/RBAM_026090___ytbE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04241___ytbE-RBAM_026090___ytbE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04241___ytbE-RBAM_026090___ytbE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04241___ytbE
# 2: RBAM_026090___ytbE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 854
# Identity:     643/854 (75.3%)
# Similarity:   643/854 (75.3%)
# Gaps:          22/854 ( 2.6%)
# Score: 2324.5
# 
#
#=======================================

BSNT_04241___      1 ATGACAACACATTTACAAGCAAAAGCAACACTTCATAATGGGGTAGAAAT     50
                     ||||||||||||||||||||||||||||||.|.|||||.||.|||||.||
RBAM_026090__      1 ATGACAACACATTTACAAGCAAAAGCAACATTGCATAACGGAGTAGAGAT     50

BSNT_04241___     51 GCCTTGGTTCGGCCTCGGCGTGTTCCAAGTGGAAGAAGGATCTGAACTGG    100
                     |||||||||||||.||||.||.|||.||||.||.|||||..|.|||||.|
RBAM_026090__     51 GCCTTGGTTCGGCATCGGAGTTTTCAAAGTAGAGGAAGGCGCGGAACTCG    100

BSNT_04241___    101 TAAACGCAGTTAAAACTGCCATT-GTTCACGGGTACCGCAGTATTGATAC    149
                     |.||.||.||.||||| |.|||| ||.|||||.||.|||||..|||||||
RBAM_026090__    101 TCAATGCGGTGAAAAC-GGCATTGGTGCACGGCTATCGCAGCGTTGATAC    149

BSNT_04241___    150 TGCAGCAATCTATGGAAATGAAGCTGGAGTCGGAGAAGGGATTCGGGAAG    199
                     .||.||.||.||.||||||||||..||.|||||.|||||.||.||..|||
RBAM_026090__    150 CGCCGCGATTTACGGAAATGAAGAAGGTGTCGGCGAAGGCATCCGCCAAG    199

BSNT_04241___    200 GCATTGAAGAAGCAGGCATTTCAA-GAGAGGATCTGTTTATCACATCGAA    248
                     |..|..||||||| ||.|||..|| |.||.||..|.|||.||||.||.||
RBAM_026090__    200 GGCTGCAAGAAGC-GGGATTAAAACGTGAAGACATTTTTGTCACGTCAAA    248

BSNT_04241___    249 AGTATGGAATGCGGATTTAGGCTACGAAGAAACACTCGCCGCGTTTGAAA    298
                     ||||||||||||.||||||||.||.||||||||..|....||||||||.|
RBAM_026090__    249 AGTATGGAATGCCGATTTAGGATATGAAGAAACGTTAAAAGCGTTTGACA    298

BSNT_04241___    299 CAAGTCTGTCCAAACTCGGTCTGGATTATTTGGATCTATACCTCATCCAC    348
                     ||||..|....|||||||||.|.||||||||||||.||||..|.|||||.
RBAM_026090__    299 CAAGCTTAGAAAAACTCGGTTTAGATTATTTGGATTTATATTTGATCCAT    348

BSNT_04241___    349 TGGCCTGTAGAAGGAAAGTATAAAGAAGCTTGGAGAGCGCTTGAAACGCT    398
                     ||||||||.|||||||||||.|..||.||.|||.|.|||||.|||||.||
RBAM_026090__    349 TGGCCTGTCGAAGGAAAGTACATCGATGCGTGGCGGGCGCTCGAAACCCT    398

BSNT_04241___    399 GTATAAAGAAGGCCGTATCAAAGCGATTGGCGTAAGCAACTTCCAAATTC    448
                     .||....||.||.||.||.||.|||||.||.||.|||||.||||||||||
RBAM_026090__    399 CTACCGGGATGGACGCATTAAGGCGATCGGGGTCAGCAATTTCCAAATTC    448

BSNT_04241___    449 ACCATCTTGAAGATCTGATGACGGCAG-CTGAAATTAAGCCTATGATTAA    497
                     |||||||..||.||||.||||..| || |.|||||.|||||.|||||.||
RBAM_026090__    449 ACCATCTGAAACATCTCATGAAAG-AGACGGAAATCAAGCCGATGATCAA    497

BSNT_04241___    498 CCAAGTGGAATTTCACCCGCGCCTCACACAAAAAGA----GTTGATAAGA    543
                     |||.|||||.||.||.||.||.||.|||||.|||||    .|||.|    
RBAM_026090__    498 CCAGGTGGAGTTCCATCCTCGTCTGACACAGAAAGAACTGCTTGCT----    543

BSNT_04241___    544 TACTGC-CAAAATCAGGGCATCCAGATGGAGGCTTGGTCACCTTTAATGC    592
                     |.|||| |..|| ||.|||||.|||.|.||.||.|||||.||.||.||||
RBAM_026090__    544 TTCTGCACTGAA-CAAGGCATTCAGCTTGAAGCGTGGTCGCCATTGATGC    592

BSNT_04241___    593 AGGGACAGCTGCTGGATCACCCTGTATTGGCTGACATCGCTCAAACATAT    642
                     |.||.||||||||.||||||.|.||.||....||.||||||.|.|..||.
RBAM_026090__    593 AAGGTCAGCTGCTTGATCACACCGTCTTACAGGAAATCGCTGAGAAGTAC    642

BSNT_04241___    643 AATAAATCTGTCGCACAAATTATTTTGCGCTGGGATCTGCAGCATGGCAT    692
                     ...|||||.|.|||.|||.|.|||||||||||||||.|||||.|.||..|
RBAM_026090__    643 GGCAAATCAGCCGCTCAAGTGATTTTGCGCTGGGATTTGCAGAACGGTGT    692

BSNT_04241___    693 CATTACGATTCCTAAATCAACGAAGGAACACCGCATTAAAGAAAATGCAA    742
                     |||.||.|||||.|||||||||||..|||||||.|||.||||||||||||
RBAM_026090__    693 CATCACCATTCCGAAATCAACGAAAAAACACCGTATTGAAGAAAATGCAA    742

BSNT_04241___    743 GCGTATTTGACTTTGAATTAACG-CAG--GATGACATGAACCGAATCGAT    789
                     ..||.|||||.||.|||.|   | |||  ||.||.|||||.||.||.|||
RBAM_026090__    743 ATGTCTTTGATTTCGAACT---GTCAGCTGACGATATGAAGCGGATTGAT    789

BSNT_04241___    790 GCACTGAATGAAAACTTGCGCGTCGGTCCTGATCCGGACAACTTTGATTT    839
                     |..|||||.||||||.|.||.||||||||.||.||.|||||.||||||||
RBAM_026090__    790 GATCTGAACGAAAACCTCCGTGTCGGTCCGGACCCTGACAATTTTGATTT    839

BSNT_04241___    840 TTAA    843
                     ||||
RBAM_026090__    840 TTAA    843


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04241 and RBAM_026090

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
