Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04268 and RBAM_026270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:42
# Commandline: needle
# -asequence dna-align/BSNT_04268___ytsJ.1.9828.seq
# -bsequence dna-align/RBAM_026270___ytsJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04268___ytsJ-RBAM_026270___ytsJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04268___ytsJ-RBAM_026270___ytsJ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04268___ytsJ
# 2: RBAM_026270___ytsJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1233
# Identity: 1029/1233 (83.5%)
# Similarity: 1029/1233 (83.5%)
# Gaps: 0/1233 ( 0.0%)
# Score: 4329.0
#
#
#=======================================
BSNT_04268___ 1 ATGTCATTAAGAGAAGAAGCATTACACCTGCATAAAGTCAACCAGGGGAA 50
||||||||||||||||||||.|||||..|.||.|||||.||.||.||.||
RBAM_026270__ 1 ATGTCATTAAGAGAAGAAGCGTTACATTTACACAAAGTAAATCAAGGAAA 50
BSNT_04268___ 51 ACTGGAGTCTAAATCAAAAGTAGAGGTCAGAAATGCAAAAGATCTAAGCC 100
.|||||.||.|||.||||.|||||.||||||||||||.|.||..||||||
RBAM_026270__ 51 GCTGGAATCAAAAGCAAAGGTAGAAGTCAGAAATGCAGATGACTTAAGCC 100
BSNT_04268___ 101 TCGCTTATTCTCCGGGTGTTGCAGAACCGTGTAAGGATATTCATGAAGAC 150
|.||.||.|||||.||.||.||.||.||.|||||.||.|||.||||.||.
RBAM_026270__ 101 TTGCCTACTCTCCCGGAGTAGCTGAGCCTTGTAAAGAGATTTATGACGAT 150
BSNT_04268___ 151 ATTAACAAAGTATATGATTATACAATGAAGGGGAACATGGTAGCAGTTGT 200
|..||||||||||||||||||||||||||||||||||||||||||||.||
RBAM_026270__ 151 AAAAACAAAGTATATGATTATACAATGAAGGGGAACATGGTAGCAGTCGT 200
BSNT_04268___ 201 AACTGACGGTACAGCTGTGCTTGGCCTTGGAAACATCGGCCCTGAAGCGG 250
|||.|||||..||||.||.||.||.||.||.||.|||||.||||||||..
RBAM_026270__ 201 AACAGACGGATCAGCCGTTCTCGGTCTCGGTAATATCGGGCCTGAAGCTT 250
BSNT_04268___ 251 CGCTTCCTGTTATGGAAGGGAAAGCAGTTCTTTTCAAAAGCTTTGCGGGC 300
|.|||||.||.||||||||||||||.||.||.||||||||.||.||||||
RBAM_026270__ 251 CACTTCCGGTCATGGAAGGGAAAGCGGTGCTGTTCAAAAGTTTCGCGGGC 300
BSNT_04268___ 301 GTAGATGCGTTCCCGATTGCTTTAAACACAAACGATGTTGATAAAATCGT 350
||.|||||.||||||||.||..|..|||||||||||||.||.||||||.|
RBAM_026270__ 301 GTGGATGCATTCCCGATCGCGCTTGACACAAACGATGTGGACAAAATCAT 350
BSNT_04268___ 351 TGAAACTGTAAAATTGCTGGAACCGACATTTGGCGGCGTCAACCTTGAAG 400
|||.||||||||..||||.|.|||||||||.|||||.|||||||||||||
RBAM_026270__ 351 TGACACTGTAAAGCTGCTTGCACCGACATTCGGCGGTGTCAACCTTGAAG 400
BSNT_04268___ 401 ATATTGCAGCGCCAAACTGCTTTATCATTGAAGAGCGCCTCAAAAAAGAA 450
|||||||.|||||.||||||||.||.||.|||||||||||.|||||||||
RBAM_026270__ 401 ATATTGCGGCGCCGAACTGCTTCATTATCGAAGAGCGCCTGAAAAAAGAA 450
BSNT_04268___ 451 ACAAACATCCCGGTTTTCCATGATGATCAGCACGGTACTGCCATTGTAAC 500
||||||||.|||||||||||.||||||||||||||.||||||||||||||
RBAM_026270__ 451 ACAAACATTCCGGTTTTCCACGATGATCAGCACGGCACTGCCATTGTAAC 500
BSNT_04268___ 501 CGTAGCAGGTCTTGTGAACGCGCTGAAACTGTCTGGAAAATCCATGTCAT 550
|||.||.||.|||||.||||||||||||.|.||.||.|||||||||||||
RBAM_026270__ 501 CGTTGCCGGACTTGTAAACGCGCTGAAATTATCAGGTAAATCCATGTCAT 550
BSNT_04268___ 551 CCATTAAAGTTGTCGCAAACGGCGCGGGTGCGGCTGGCATTGCGATTATC 600
|||||||||||||.||||||||.|||||.|||||.|||||.|||||.|||
RBAM_026270__ 551 CCATTAAAGTTGTGGCAAACGGAGCGGGAGCGGCAGGCATCGCGATCATC 600
BSNT_04268___ 601 AAGCTTCTTCATCATTATGGCGTTCGCGACATTGTGATGTGCGATTCCAA 650
|||||||||.|.||||..|||||.||||||||.||.||||||||.||.||
RBAM_026270__ 601 AAGCTTCTTTACCATTTCGGCGTACGCGACATCGTAATGTGCGACTCTAA 650
BSNT_04268___ 651 AGGGGCCATTTATGAAGGGCGCCCGAACGGCATGAACGATGTCAAAAATG 700
||||||.|||||.||||||||.|||..|||||||||||..||.|||||.|
RBAM_026270__ 651 AGGGGCGATTTACGAAGGGCGTCCGGCCGGCATGAACGCAGTGAAAAACG 700
BSNT_04268___ 701 AAGTGGCGAAGTTCACGAACCAAGATCGCAAAGACGGTTCTCTGAAAGAT 750
|||||||||||||.||.||||||||.|||||.||||||||.|||.|.|||
RBAM_026270__ 701 AAGTGGCGAAGTTTACAAACCAAGACCGCAACGACGGTTCGCTGCAGGAT 750
BSNT_04268___ 751 GTCATCATTGATGCTGACGTATTTATCGGTGTCTCTGTAGCAGGCGCGTT 800
|||||.|..|||||.|||||.||||||||.||.||.||.|.|||||||.|
RBAM_026270__ 751 GTCATTAAAGATGCAGACGTCTTTATCGGCGTATCAGTCGAAGGCGCGCT 800
BSNT_04268___ 801 AACAAAAGAAATGGTTCAAAGCATGGCAAAAGATCCGATTATCTTTGCAA 850
.||.|||||||||||..||||||||||.|||||||||||||||||.||||
RBAM_026270__ 801 GACGAAAGAAATGGTGGAAAGCATGGCGAAAGATCCGATTATCTTCGCAA 850
BSNT_04268___ 851 TGGCAAATCCAAATCCGGAAATCATGCCGGAAGATGCGCGTGAAGCCGGA 900
||||.||.||.|||||||||||||||||.|||||.|||||.|.||||||.
RBAM_026270__ 851 TGGCCAACCCGAATCCGGAAATCATGCCTGAAGACGCGCGCGCAGCCGGC 900
BSNT_04268___ 901 GCAAGCGTTATCGGAACTGGCCGTTCTGACTTCCCGAACCAAGTAAACAA 950
||||||||.||||||||.|||||||||||.|||||||||||.||.|||||
RBAM_026270__ 901 GCAAGCGTAATCGGAACAGGCCGTTCTGATTTCCCGAACCAGGTCAACAA 950
BSNT_04268___ 951 TGTTCTTGCATTCCCTGGTATTTTCCGCGGAGCACTTGATGTGCGTGCCA 1000
.||.||.|||||||||||.||||||||||||||.|||||.||.||.||.|
RBAM_026270__ 951 CGTCCTGGCATTCCCTGGAATTTTCCGCGGAGCGCTTGACGTTCGCGCGA 1000
BSNT_04268___ 1001 CTCATATTAACGAGGAAATGAAAATCGCAGCGGTTGAAGCCATTGCTTCA 1050
||||.||.|||||.|||||||||||.||.|||||||||||.||||||||.
RBAM_026270__ 1001 CTCACATCAACGAAGAAATGAAAATTGCTGCGGTTGAAGCGATTGCTTCC 1050
BSNT_04268___ 1051 CTGGTTTCAGAAGATGAGCTTAGCGCAGATTATGTCATCCCTGCACCGTT 1100
||.|||.||||.||.||..|.|||||.||||||||||||||.||.||.||
RBAM_026270__ 1051 CTTGTTACAGAGGAAGAATTAAGCGCTGATTATGTCATCCCGGCTCCATT 1100
BSNT_04268___ 1101 TGATAAACGTGTTGCGCCTGCTGTTGCGAAGGCTGTGGCAAAAGCTGCGA 1150
|||.||||||||.||.|||||.||||||||.|||||.||.|||||.||||
RBAM_026270__ 1101 TGACAAACGTGTGGCTCCTGCCGTTGCGAAAGCTGTTGCGAAAGCAGCGA 1150
BSNT_04268___ 1151 TGGAAACAGGTGTTGCAAGAATCACTGTTGACCCTGAGGAAGTCGCAGAA 1200
|||||||.||.||.||.|||||.||.||.||.|||||||||||.||.|||
RBAM_026270__ 1151 TGGAAACGGGCGTCGCCAGAATTACGGTCGATCCTGAGGAAGTGGCTGAA 1200
BSNT_04268___ 1201 AAAACAAGAAAACTTACGATTATTGGTGAATAA 1233
|||||||||.|.||.|||.|.||.||.||||||
RBAM_026270__ 1201 AAAACAAGACAGCTCACGGTCATCGGCGAATAA 1233
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