Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04284 and RBAM_026360

See Amino acid alignment / Visit BSNT_04284 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:44
# Commandline: needle
#    -asequence dna-align/BSNT_04284.1.9828.seq
#    -bsequence dna-align/RBAM_026360___ytzD.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04284-RBAM_026360___ytzD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04284-RBAM_026360___ytzD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04284
# 2: RBAM_026360___ytzD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 138
# Identity:      96/138 (69.6%)
# Similarity:    96/138 (69.6%)
# Gaps:          12/138 ( 8.7%)
# Score: 336.5
# 
#
#=======================================

BSNT_04284         1 ATGATGAAAAAAGAACCGGAACGCTATATTTATGATGAACAAGAAAGCCA     50
                        |||...|||||||..||.||.||.||.|||||||||.|||||||..|
RBAM_026360__      1 ---ATGCGCAAAGAACAAGACCGTTACATCTATGATGAAAAAGAAAGTGA     47

BSNT_04284        51 GGAGACAACAAGGCTCATTTCAGAAGCATATCAAAGCGGTTATGTCGATA    100
                     .||.||..|.||||||||.|||||.|||||..|||||||||||||||..|
RBAM_026360__     48 AGAAACGGCCAGGCTCATCTCAGAGGCATACGAAAGCGGTTATGTCGGCA     97

BSNT_04284       101 TGCCTGATCAGGAGTCTTCATCTCCTGCAGAA---TAA    135
                     ||      .||||..|.||..|||||.|||||   |||
RBAM_026360__     98 TG------GAGGAAGCCTCTGCTCCTTCAGAAAATTAA    129


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