Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04309 and RBAM_026530

See Amino acid alignment / Visit BSNT_04309 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:46
# Commandline: needle
#    -asequence dna-align/BSNT_04309___braB.1.9828.seq
#    -bsequence dna-align/RBAM_026530___braB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04309___braB-RBAM_026530___braB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04309___braB-RBAM_026530___braB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04309___braB
# 2: RBAM_026530___braB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1356
# Identity:    1055/1356 (77.8%)
# Similarity:  1055/1356 (77.8%)
# Gaps:          33/1356 ( 2.4%)
# Score: 4095.5
# 
#
#=======================================

BSNT_04309___      1 ATGAAACACTCACTGCCTGTCAAAGATACCATTATTATTGGTTTCATGCT     50
                     ||||||||||||||.|||||||||||||||.|||||||.|||||||||||
RBAM_026530__      1 ATGAAACACTCACTACCTGTCAAAGATACCGTTATTATCGGTTTCATGCT     50

BSNT_04309___     51 ATTTGCGTTATTCTTTGGAGCAGGAAATATGATCTATCCGCCGGAACTTG    100
                     .||.||..|.||.||.||.||||||||||||||.|||||||||||.||.|
RBAM_026530__     51 TTTCGCACTTTTTTTCGGGGCAGGAAATATGATATATCCGCCGGAGCTCG    100

BSNT_04309___    101 GACAAGCAGCCGGACACAACGTCTGGAAGGCCATCGGCGGATTTTTACTG    150
                     |.|||||.||.||.||.||.||||||||.||.||.|||||.||.||||||
RBAM_026530__    101 GGCAAGCGGCGGGGCATAATGTCTGGAAAGCGATGGGCGGTTTCTTACTG    150

BSNT_04309___    151 ACAGGGGTAGGCCTGCCGCTTCTCGGCATTATCGCCATCGCATTAACCGG    200
                     ||.||.|||||.|||||||||.|.||.||||||||||||||||||||.||
RBAM_026530__    151 ACCGGCGTAGGTCTGCCGCTTTTGGGTATTATCGCCATCGCATTAACGGG    200

BSNT_04309___    201 TAAGGACGCTAAAGGCCTTGCTGACAAAGCGCACCCTGTTTTCGGCACAA    250
                     .||.|||||.|||||.|||||.||.|||||.||.||.||.|||||.||.|
RBAM_026530__    201 CAAAGACGCAAAAGGGCTTGCCGATAAAGCTCATCCGGTATTCGGGACTA    250

BSNT_04309___    251 TCTTTACTGTCGTGCTTTATTTATCAATCGGACCATTATTCGCCATCCCG    300
                     |.||.||.||.||||||||||||||||||||.||..|.|||||.||.|||
RBAM_026530__    251 TTTTCACCGTTGTGCTTTATTTATCAATCGGGCCGCTTTTCGCGATTCCG    300

BSNT_04309___    301 AGAACAGGAACTGTTTCATATGAAATTGGCGCTGTTCCGTTTTTGACTGG    350
                     |||||.|||||.||||||||||||||.||.||.|||||||||||.|..||
RBAM_026530__    301 AGAACCGGAACCGTTTCATATGAAATCGGTGCAGTTCCGTTTTTAAGCGG    350

BSNT_04309___    351 CGTACCAGAAAGACTTTCTTTATTAATATTTACAC--TTATCTTTTTCGG    398
                     |.|.||.||||||.|.||||||||  |.|||.|||  |.||||||||...
RBAM_026530__    351 CATTCCGGAAAGATTATCTTTATT--TGTTTTCACGTTGATCTTTTTTTC    398

BSNT_04309___    399 CGTTACGTACTATTTAGCGTTAAACCCATCCAAGGTTGTCGATCGAGTCG    448
                     ..|||||||.||||||||..|.||.||.|||||..|.||.||..||||||
RBAM_026530__    399 TATTACGTATTATTTAGCTCTTAATCCTTCCAAAATCGTTGACAGAGTCG    448

BSNT_04309___    449 GAAAAATTCTGACTCCCATCAAATTCACGATTATTTTAATCATTGTTCTC    498
                     ||||.|||.|||||||.||.||||||...||||||||||||||.||..|.
RBAM_026530__    449 GAAAGATTTTGACTCCTATTAAATTCGGTATTATTTTAATCATCGTCGTA    498

BSNT_04309___    499 AAAGCCATCTTCACGCCGATGGGCGGATTGGGCGCCGTGACA-GAAGCAT    547
                     ||||||||..||||.||||||||||||.|||||||||| ||| .|.||||
RBAM_026530__    499 AAAGCCATTGTCACTCCGATGGGCGGACTGGGCGCCGT-ACATCAGGCAT    547

BSNT_04309___    548 ATAAAGGAACACCGGTTTTTAAAGGATTTTTAGAAGGCTATAAAACAATG    597
                     ||...|||||.|||||.||.|||||||||||.||||||||||||||||||
RBAM_026530__    548 ATTCCGGAACGCCGGTGTTCAAAGGATTTTTGGAAGGCTATAAAACAATG    597

BSNT_04309___    598 GACGCACTTGCTTCAATTGTATTTGGCGTTGTCGTTGTAAATGCTGTAAA    647
                     |||||.||.||.||.||.||.||.|||||.||.||.||.||.|||||.||
RBAM_026530__    598 GACGCGCTCGCCTCGATCGTCTTCGGCGTCGTTGTCGTCAACGCTGTTAA    647

BSNT_04309___    648 AAGCAAAGGCGTTACACAGTCTAAAGCTCTTGCTGCAGCCTGCATTAAAG    697
                     |||||..|||||.||.|||..||||||.||.||.||.||.||.|||||||
RBAM_026530__    648 AAGCAGGGGCGTCACCCAGCGTAAAGCGCTCGCCGCCGCTTGTATTAAAG    697

BSNT_04309___    698 CAGGTGTGATTGCAGCTTTAGGCCTGACTTTCATTTATGTATCCCTTGCT    747
                     |.|||.||||||||||...|||..||||.|||||||||.||||..|.||.
RBAM_026530__    698 CGGGTCTGATTGCAGCGGCAGGTTTGACATTCATTTATTTATCTTTGGCC    747

BSNT_04309___    748 TATTTAGGTGCAACAAGCACAAATGCCATCGGTCCTGTTGGTGAAGGAGC    797
                     |||||.||.||.||||||||..|.||..|.||.||..|.||.|||||.||
RBAM_026530__    748 TATTTGGGAGCGACAAGCACGGACGCTGTGGGGCCGCTCGGCGAAGGCGC    797

BSNT_04309___    798 TAAAATTTTATCTGCGTCTTCCCATTATTTATTCGGGTCATTGGGCAACA    847
                     .||.||||||||.||.||.||..||||..|.|||||.|||.||||.||||
RBAM_026530__    798 AAAGATTTTATCAGCTTCATCTGATTACCTGTTCGGTTCACTGGGAAACA    847

BSNT_04309___    848 TCGTACTCGGAGCAGCGATTACAGTCGCATGTTTAACAACAAGCATCGGC    897
                     ||||.|||||..|.||.||.||.||.||.||||||||.|||||||||||.
RBAM_026530__    848 TCGTTCTCGGCTCTGCCATCACCGTTGCGTGTTTAACGACAAGCATCGGG    897

BSNT_04309___    898 CTTGTCACATCTTGCGGCCAATATTTTTCAAAACTTATTCCGGCATTATC    947
                     ||||||||||||||||||.||||||||||||||.|.|||||.||.|||||
RBAM_026530__    898 CTTGTCACATCTTGCGGCGAATATTTTTCAAAATTGATTCCCGCTTTATC    947

BSNT_04309___    948 ATATAAAATTGTCGTTACGATTGTCACGTTATTCAGCTTGATCATTGCGA    997
                     |||.|||||.||.|||||||||||||||.|.|||||..||...|||.|.|
RBAM_026530__    948 ATACAAAATGGTGGTTACGATTGTCACGCTGTTCAGTCTGGCGATTTCAA    997

BSNT_04309___    998 ATTTCGGACTCGCGCAAATTATCGCGTTTTCTGTTCCTATTTTATCAGCT   1047
                     ||||||||||.||..|.|||||.||.|||||.|||||||||||||||||.
RBAM_026530__    998 ATTTCGGACTTGCTGAGATTATTGCATTTTCAGTTCCTATTTTATCAGCC   1047

BSNT_04309___   1048 ATCTATCCGCTTGCCATTGTCATTATCGTTCTTTCCTTCATCGATAAGAT   1097
                     ||.||.|||||.||.||||||||||||||.||||||||.||.|||||.||
RBAM_026530__   1048 ATTTACCCGCTGGCGATTGTCATTATCGTCCTTTCCTTTATTGATAAAAT   1097

BSNT_04309___   1098 CTTTAAAGAAAGACGCGAAGTGTACATCGCTTGCTTGATCGGTACAGGAC   1147
                     ||||||.||||||||||||||.||.|||||.|||.|||||||.|||||.|
RBAM_026530__   1098 CTTTAAGGAAAGACGCGAAGTCTATATCGCCTGCCTGATCGGAACAGGGC   1147

BSNT_04309___   1148 TTTTCAGTATTTTAGACGGTATCAAAGCAGCCGGTTTTTCACTTGGATCT   1197
                     |.||||||||.||.||||||.|.||.|||||.||..||.|.||.|||||.
RBAM_026530__   1148 TGTTCAGTATCTTGGACGGTTTGAAGGCAGCAGGCATTCCGCTCGGATCA   1197

BSNT_04309___   1198 TTAGATGTGTTTC-TAAATGCGAATCTTCCTCTTTACAGCCTCGGCATCG   1246
                     |||||| |..||| ||||.||.||||||||.|||||||||.|.||.||||
RBAM_026530__   1198 TTAGAT-TCATTCTTAAACGCAAATCTTCCGCTTTACAGCATGGGAATCG   1246

BSNT_04309___   1247 GCTGGGTGCTTCCAGGAATCGTCGGAGCGGTTATCGGCTATGTGC----T   1292
                     |||||||||||||.||.||.|.|||||||.|.||||||    |||    |
RBAM_026530__   1247 GCTGGGTGCTTCCGGGCATTGCCGGAGCGATCATCGGC----TGCATTAT   1292

BSNT_04309___   1293 GACCTTATTCATCGGACCATCCAAACAGCTT--AATGAAATAAGTTAA--   1338
                     .||.||.||.|.|.|.||..|||       |  |||.||||||...||  
RBAM_026530__   1293 CACGTTTTTTACCAGCCCGCCCA-------TCGAATTAAATAAAGCAAAA   1335

BSNT_04309___   1338 ------   1338
                           
RBAM_026530__   1336 TCGTAA   1341


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