Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04324 and RBAM_026810

See Amino acid alignment / Visit BSNT_04324 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:47
# Commandline: needle
#    -asequence dna-align/BSNT_04324___acuA.1.9828.seq
#    -bsequence dna-align/RBAM_026810___acuA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04324___acuA-RBAM_026810___acuA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04324___acuA-RBAM_026810___acuA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04324___acuA
# 2: RBAM_026810___acuA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 635
# Identity:     514/635 (80.9%)
# Similarity:   514/635 (80.9%)
# Gaps:           4/635 ( 0.6%)
# Score: 2081.0
# 
#
#=======================================

BSNT_04324___      1 GTGGAACATCATAAAACATACCATTCAGCAAACATCAAAACAGCAACCGG     50
                     |||.|||||||||||||.||||||||..|||..||..|.||||||.||||
RBAM_026810__      1 GTGAAACATCATAAAACGTACCATTCTTCAACAATTCAGACAGCAGCCGG     50

BSNT_04324___     51 --CTCTTTACTGATAGAAGGGCCTGTCTCTCCAGAGGATTTGGCAGGTTA     98
                       ||||||  |..||||||||||.||..||||||.||||.|.|||...||
RBAM_026810__     51 CCCTCTTT--TAGTAGAAGGGCCCGTTCCTCCAGGGGATCTAGCACAGTA     98

BSNT_04324___     99 TGAGTTTCATAAAGATTTAACCGCATTTCGCCCGCCTCGCGAGCAGCATG    148
                     ||||||||||.|||...|.||.||.|||||||..||||..||.|||||..
RBAM_026810__     99 TGAGTTTCATGAAGGCCTGACAGCCTTTCGCCTTCCTCATGAACAGCACA    148

BSNT_04324___    149 AAGCGCTAGTCGACATTGCAGGCCTTCCCGAAGGGCGCATTATTATTGCC    198
                     |||||.||.||||.||.||.||.|||||.|||||.||.||.|||||||||
RBAM_026810__    149 AAGCGTTAATCGAGATCGCCGGGCTTCCTGAAGGTCGGATCATTATTGCC    198

BSNT_04324___    199 AGAGATGGCCGAACCATTATCGGCTATGTCACGTATTTATATCCTGACCC    248
                     ||.||.||.|..||.||||||||||||||.|||||||||||||||||.||
RBAM_026810__    199 AGGGACGGACAGACGATTATCGGCTATGTGACGTATTTATATCCTGATCC    248

BSNT_04324___    249 GCTCGAAAGATGGTCTGAAGGAAATATGGAGGATTTGATTGAGCTCGGAG    298
                     |||.|||.|.||||||||.|||||||||||.||..|..||||.|||||.|
RBAM_026810__    249 GCTTGAACGGTGGTCTGACGGAAATATGGAAGACCTCCTTGAACTCGGGG    298

BSNT_04324___    299 CCATCGAAGTAGCGCCGGACTATCGGGGATGCGCTGTCGGAAAGACGCTC    348
                     |.|||||.||.||.||.|.|||..||||.||..||||||||||.|||.|.
RBAM_026810__    299 CGATCGAGGTCGCTCCCGGCTACAGGGGCTGTTCTGTCGGAAAAACGTTG    348

BSNT_04324___    349 CTGACCGTCAGCATGATGGATGAACAAATGGAAAACTACATTGTGATGAC    398
                     |||||.||||||||||||||||||||.||||||...|||||..|.|||||
RBAM_026810__    349 CTGACAGTCAGCATGATGGATGAACAGATGGAACGGTACATCATCATGAC    398

BSNT_04324___    399 GACAGAATATTACTGGCATTGGGATTTAAAAGGGATGAAAAAAGATGTGT    448
                     |||.|||||||||||||||||||||||||||||.||||||||||||||||
RBAM_026810__    399 GACGGAATATTACTGGCATTGGGATTTAAAAGGAATGAAAAAAGATGTGT    448

BSNT_04324___    449 GGGAATACAGAAAGATCATGGAAAAGATGATGAATGCAGGCGGATTGGTC    498
                     |||||||||||||||||||||||||||||||||||||.||.||..|.|||
RBAM_026810__    449 GGGAATACAGAAAGATCATGGAAAAGATGATGAATGCCGGGGGTCTTGTC    498

BSNT_04324___    499 TGGTTTGCAACGGATGAGCCGGAGATCAGCTCCCACCCTGCAAACTGTCT    548
                     |||||.|||||||||||.|||||.||||||||.||.||.||.||.|||||
RBAM_026810__    499 TGGTTCGCAACGGATGAACCGGAAATCAGCTCTCATCCGGCCAATTGTCT    548

BSNT_04324___    549 GATGGCCCGCATTGGGAAAAACGTCAGCCAAGAATCAATTGAGCAATTTG    598
                     ||||||||||||.||.|...|||||||.||.||.||||||||.||.||.|
RBAM_026810__    549 GATGGCCCGCATCGGCAGGCACGTCAGTCAGGAGTCAATTGAACAGTTCG    598

BSNT_04324___    599 ACAGGCTCCGTTTTTATCATCGTTATATGTATTAA    633
                     |||||||.|||||||||||.||.|.||||||||.|
RBAM_026810__    599 ACAGGCTTCGTTTTTATCAGCGATTTATGTATTGA    633


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