Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04559 and RBAM_028110

See Amino acid alignment / Visit BSNT_04559 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:00
# Commandline: needle
#    -asequence dna-align/BSNT_04559___yuaG.1.9828.seq
#    -bsequence dna-align/RBAM_028110___yuaG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04559___yuaG-RBAM_028110___yuaG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04559___yuaG-RBAM_028110___yuaG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04559___yuaG
# 2: RBAM_028110___yuaG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1534
# Identity:    1231/1534 (80.2%)
# Similarity:  1231/1534 (80.2%)
# Gaps:           8/1534 ( 0.5%)
# Score: 4933.0
# 
#
#=======================================

BSNT_04559___      1 ATGACAATGCCGATTATAATGATCATCGGAGTTGTATTCTTTTTATTAAT     50
                     |||||.|||||||||||.||..|.||||||.|.||||||||||||.|.||
RBAM_028110__      1 ATGACTATGCCGATTATCATCGTTATCGGAATCGTATTCTTTTTACTCAT     50

BSNT_04559___     51 TGCACTAATAGCTGTGTTTATTACGAAGTATCGTACAGCAGGGCCTGATG    100
                     .|||||.||.|||||.||||||||||||||.||.||.||.|||||.||.|
RBAM_028110__     51 CGCACTTATTGCTGTATTTATTACGAAGTACCGGACGGCGGGGCCGGACG    100

BSNT_04559___    101 AAGCGTTAATTGTAACGGGGAGCTATCTGGGCAATAAAAATGTTCATGTC    150
                     ||||..|.||.||.||.||.||.|||.||||.|||||.||.||.||..|.
RBAM_028110__    101 AAGCCCTTATCGTGACCGGAAGTTATTTGGGAAATAAGAACGTCCACATT    150

BSNT_04559___    151 GATGAAGGCGGCAACCGTATTAAAATCGTCCGCGGCGGAGGAACCTTTGT    200
                     |||||||||||.||.|||.|.|||||||||||.|||||.|||||.||.||
RBAM_028110__    151 GATGAAGGCGGAAATCGTCTGAAAATCGTCCGGGGCGGGGGAACGTTCGT    200

BSNT_04559___    201 CCTTCCCGTCTTCCAGCAGGCAGAGCCGCTAAGCCTATTATCAAGCAAAC    250
                     .||.||.||.||||||||||||||.||.||.||..||.|.||||||||||
RBAM_028110__    201 GCTCCCGGTATTCCAGCAGGCAGAACCTCTCAGTTTACTGTCAAGCAAAC    250

BSNT_04559___    251 TCGATGTTTCGACACCTGAAGTCTATACAGAACAAGGAGTGCCAGTAATG    300
                     |.|||||.||.|||||.||||||||||||||.|||||.|||||.||||||
RBAM_028110__    251 TTGATGTCTCTACACCCGAAGTCTATACAGAGCAAGGCGTGCCGGTAATG    300

BSNT_04559___    301 GCCGATGGAACTGCGATTATTAAAATCGGCGGTTCTATAGGAGAAATCGC    350
                     |||||||||||.||.||||||||||||||.||.|||||..|.||||||||
RBAM_028110__    301 GCCGATGGAACCGCCATTATTAAAATCGGAGGCTCTATCAGTGAAATCGC    350

BSNT_04559___    351 TACAGCGGCCGAACAATTTTTAGGGAAATCAAAAGACGACCGTGAGCAGG    400
                     .|||||.||.|||||||||||.||||||||.||.||.|||||||||||||
RBAM_028110__    351 AACAGCAGCTGAACAATTTTTGGGGAAATCTAAGGAAGACCGTGAGCAGG    400

BSNT_04559___    401 AAGCGCGGGAGGTTTTAGAAGGCCACCTTCGTTCCATTCTCGGCTCAATG    450
                     |.|||||||||||..|.||||||||.||.||.|||||.||||||||.|||
RBAM_028110__    401 AGGCGCGGGAGGTGCTGGAAGGCCATCTGCGCTCCATCCTCGGCTCCATG    450

BSNT_04559___    451 ACAGTAGAAGAAATCTATAAAAACAGAGAAAAATTCTCTCAAGAGGTGCA    500
                     ||.||.|||||.||.|||||||||||.|||||.||.|||||.||.||.||
RBAM_028110__    451 ACCGTTGAAGAGATTTATAAAAACAGGGAAAAGTTTTCTCAGGAAGTCCA    500

BSNT_04559___    501 GCGTGTCGCTTCACAGGATCTCGCGAAAATGGGGCTGGTAATCGTCTCGT    550
                     |||.|||||.||.||||||||.||.|||||||||||.||.|||||.||.|
RBAM_028110__    501 GCGGGTCGCGTCTCAGGATCTTGCTAAAATGGGGCTCGTGATCGTTTCTT    550

BSNT_04559___    551 TTACCATTAAAGATGTTCGTGATAAAAACGGTTATCTTGAATCATTAGGG    600
                     ||||.||||||||.||.||.|||||||||||.|||||||||||||||||.
RBAM_028110__    551 TTACGATTAAAGACGTCCGCGATAAAAACGGCTATCTTGAATCATTAGGT    600

BSNT_04559___    601 AAACCGAGAATTGCCCAAGTAAAACGCGATGCTGATATCGCAACAGCAGA    650
                     ||.||||||||.||||||||.||.||.|||||.||.||.||.||.|||||
RBAM_028110__    601 AAGCCGAGAATCGCCCAAGTCAAGCGGGATGCGGACATTGCCACGGCAGA    650

BSNT_04559___    651 GGCTGATAAAGAAACCCGAATTAAGCGGGCAGAAGCCGATAAAGACGCAA    700
                     .||.||||||||.||..|.|||||.||.||.|..||.|||||||||||||
RBAM_028110__    651 AGCGGATAAAGAGACGAGGATTAAACGCGCGGCCGCTGATAAAGACGCAA    700

BSNT_04559___    701 AAAAATCAGAACTTGAACGGGCGACGGAAATCGCTGAAGCTGAAAAACTC    750
                     ||||||||||.||.||.||||||||||||||.||||||||.||||||.||
RBAM_028110__    701 AAAAATCAGAGCTGGAGCGGGCGACGGAAATAGCTGAAGCGGAAAAAATC    750

BSNT_04559___    751 AATCAGCTCAAAATGGCTGAATTCCGCAGAGAACAAGATACGGCAAAAGC    800
                     ||||||||.||||||||.||||.|.|.|||||.||.|||||.||||||||
RBAM_028110__    751 AATCAGCTGAAAATGGCGGAATACAGAAGAGAGCAGGATACAGCAAAAGC    800

BSNT_04559___    801 GAATGCCGACCAAGCATATGATTTAGAGACTGCCAGAGCGCGCCAGCAAG    850
                     .|||||||||||.|||||||||.|.||.||.||.|.|||.||||||||.|
RBAM_028110__    801 CAATGCCGACCAGGCATATGATCTTGAAACAGCAAAAGCCCGCCAGCAGG    850

BSNT_04559___    851 TCACAGAGCAGGAAATGCAGGTTAAAATTATCGAACGCCAAAAACAAATA    900
                     |.|||||||||||||||||..||||||||||.||.||.|||||.||.||.
RBAM_028110__    851 TGACAGAGCAGGAAATGCAAATTAAAATTATTGAGCGGCAAAAGCAGATT    900

BSNT_04559___    901 GAGCTAGAAGAAAAAGAAATTCTTCGCCGTGAACGTCAATACGACTCAGA    950
                     ||..|.||.||||||||||||||.||||||||.||.|||||.|||||.||
RBAM_028110__    901 GAATTGGAGGAAAAAGAAATTCTGCGCCGTGAGCGCCAATATGACTCTGA    950

BSNT_04559___    951 GGTAAAGAAAAAAGCCGATGCAGACCGTTATTCTGTTGAGCAGTCCGCAG   1000
                     .||.|||||||||||||||||.||||||||.||.||.||.||..|.||.|
RBAM_028110__    951 AGTGAAGAAAAAAGCCGATGCTGACCGTTACTCGGTGGAACAAGCGGCCG   1000

BSNT_04559___   1001 CAGCTGAGAAAGCCAAACAGCTCGCGGAAGCCGATGCCAAGAAGTACAGT   1050
                     |.||.|..|||||.||.||||||||.|||||.||||||.||.||||||||
RBAM_028110__   1001 CGGCCGCAAAAGCGAAGCAGCTCGCAGAAGCGGATGCCGAGCAGTACAGT   1050

BSNT_04559___   1051 ATTGAAGCAATGGCAAAGGCTGAGGCGGAAAAAGTAAGAATTGACGGGCT   1100
                     ||.|||||.|||||.|||||.||.||||||...||.|||||||.|||.||
RBAM_028110__   1051 ATCGAAGCGATGGCCAAGGCGGAAGCGGAACGCGTGAGAATTGCCGGTCT   1100

BSNT_04559___   1101 AGCAAAAGCAGAAGCGGAAAAAGCGAAAGGAGAGACAGAGGCAGAGGTTA   1150
                     .||.|||||.||.||.|||||.||||.||||||.||.||.||.||.||.|
RBAM_028110__   1101 TGCTAAAGCGGAGGCTGAAAAGGCGAGAGGAGAAACCGAAGCGGAAGTCA   1150

BSNT_04559___   1151 TCCGCCTGAAAGGTCTTGCAGAAGCGGAAGCAAAAGAGAAAATTGCGGCT   1200
                     ||||||||||||||||.||||||||||||||.|||||.|||||.||.|..
RBAM_028110__   1151 TCCGCCTGAAAGGTCTCGCAGAAGCGGAAGCTAAAGAAAAAATCGCCGAA   1200

BSNT_04559___   1201 GCCTTTGAACAGTACGGGCAGGCGGCGATTTTCGATATGATTGTCAAAAT   1250
                     ||.||.|||.|.|||||||||||.||.||..|.|||||||||||.|||||
RBAM_028110__   1201 GCATTCGAAAAATACGGGCAGGCTGCAATCCTTGATATGATTGTGAAAAT   1250

BSNT_04559___   1251 GCTTCCGGAATACGCGAAACAAGCAGCGGCGCCTCTTTCAAATATTGATA   1300
                     |||.||.|||||.|||||.||||...|.|||||||||||.||.|||||||
RBAM_028110__   1251 GCTGCCTGAATATGCGAAGCAAGTCTCAGCGCCTCTTTCCAACATTGATA   1300

BSNT_04559___   1301 AAATCACCGTTGTCGATACAGGAGGAAGCGGTGAATCAA--GCGGAGCAA   1348
                     ||||.|||||.||.|||||.|||||||||||||||  ||  ||||.||.|
RBAM_028110__   1301 AAATAACCGTCGTTGATACGGGAGGAAGCGGTGAA--AACGGCGGGGCCA   1348

BSNT_04559___   1349 ACAAAGTAACCAGCTATGCGACGAACTTAATGTCAAGTCTGCAAGAAAGT   1398
                     |.|||||.||..||||.||.||.||.||||||.|..||||.||.|||||.
RBAM_028110__   1349 ATAAAGTCACAGGCTACGCAACCAATTTAATGGCCGGTCTTCAGGAAAGC   1398

BSNT_04559___   1399 TTAAAAGCATCCTCAGGAATTGATGTAAAAGAAATGCTTGAGAACTTTTC   1448
                     |||||||||||.||.|||||..||||||||||..|..|||||||.|||||
RBAM_028110__   1399 TTAAAAGCATCTTCCGGAATCAATGTAAAAGAGCTTATTGAGAATTTTTC   1448

BSNT_04559___   1449 AGGAAAAGGAAACGTAAAACAAAGCATTAATGAATTAACAAATGAAATCA   1498
                     |||.|||||.|||.||||||||||.||.||||||.|.|||||.|||.|.|
RBAM_028110__   1449 AGGCAAAGGCAACATAAAACAAAGTATAAATGAACTTACAAAAGAACTGA   1498

BSNT_04559___   1499 AAGAAGCCAA--AACGGTCCAAAAATCAGAGTAA   1530
                     ..||..|.||  |||||  ||.|...|.||.|||
RBAM_028110__   1499 GTGATTCGAACGAACGG--CACAGCCCGGAATAA   1530


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