Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04566 and RBAM_028150

See Amino acid alignment / Visit BSNT_04566 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:01
# Commandline: needle
#    -asequence dna-align/BSNT_04566___gbsB.1.9828.seq
#    -bsequence dna-align/RBAM_028150___gbsB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04566___gbsB-RBAM_028150___gbsB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04566___gbsB-RBAM_028150___gbsB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04566___gbsB
# 2: RBAM_028150___gbsB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1214
# Identity:     991/1214 (81.6%)
# Similarity:   991/1214 (81.6%)
# Gaps:          19/1214 ( 1.6%)
# Score: 4099.0
# 
#
#=======================================

BSNT_04566___      1 ATGATGACATTAAATATGAAGGTAGAAAGCATGCAGAAATTCCACACATT     50
                                    |||||.||||||||||||||.||||||||.|||||
RBAM_028150__      1 ---------------ATGAAAGTAGAAAGCATGCATAAATTCCATACATT     35

BSNT_04566___     51 TGAAATTCCGACTGTGATTAAGCATGGAATCGGAGCCATCAAGCATACGG    100
                     .|||||.|||||.||.|||||.||.||||||||.||.||..||||..|||
RBAM_028150__     36 CGAAATCCCGACAGTCATTAAACACGGAATCGGTGCGATTCAGCACGCGG     85

BSNT_04566___    101 GTGAG-GAAGT-AGCTGCACTGGGCGTTTCAAAAGCGCTCCTTGTCACAG    148
                     | .|| ||||| || .||.||.|||||..||||||||||.||.||.||||
RBAM_028150__     86 G-AAGTGAAGTCAG-AGCGCTTGGCGTCACAAAAGCGCTGCTCGTAACAG    133

BSNT_04566___    149 ACCCAGGGATTTATAAAGCCGGTGTTGCTGATCCTGTAATCGAATCACTT    198
                     ||||.||.||||||||.||.||.||.||..|.||.||.||.|||||..|.
RBAM_028150__    134 ACCCGGGAATTTATAACGCGGGAGTGGCAAACCCGGTCATTGAATCTTTG    183

BSNT_04566___    199 AAAGAAGCAGGCATTGAAGTGGTGCTCTTTAATAAAGTTGAGCCAAACCC    248
                     .|.|||||.|||||.|||||.||.||.|||||.|||||.|||||.|||||
RBAM_028150__    184 CAGGAAGCGGGCATCGAAGTCGTCCTGTTTAACAAAGTGGAGCCGAACCC    233

BSNT_04566___    249 GCCTGTCCGTCTGGTGAATGAAGGATCTGAGCTTTACAAAAAAGAGAACT    298
                     ||||||.|||||.||.||.||||||||.||.||.||.||||||||.||||
RBAM_028150__    234 GCCTGTACGTCTTGTAAACGAAGGATCAGAACTGTATAAAAAAGAAAACT    283

BSNT_04566___    299 GTAATGGTTTGGTGGCAGTCGGAGGCGGAAGCTCCATGGATACAGCAAAA    348
                     |.||.||..|.|||||.|||||.|||||||||||||||||||||||.|||
RBAM_028150__    284 GCAACGGCCTTGTGGCTGTCGGCGGCGGAAGCTCCATGGATACAGCGAAA    333

BSNT_04566___    349 GCAATCGGAGTAGAAGCGACTCACGAAGGAAGCGTGCTTGATTATGAAGC    398
                     ||.|||||.|||||||||||.|||||||||||.|||||||||||||||||
RBAM_028150__    334 GCGATCGGGGTAGAAGCGACACACGAAGGAAGTGTGCTTGATTATGAAGC    383

BSNT_04566___    399 GGCAGATGGGAAAAAACCGCTGGAAAACCGCATTCCTCCGCTGACGACAA    448
                     .||.||.||.|||||.||||||||||||||.||||||||||||||.||.|
RBAM_028150__    384 CGCGGAAGGCAAAAAGCCGCTGGAAAACCGTATTCCTCCGCTGACAACGA    433

BSNT_04566___    449 TTCCCACTACAGCTGGAACAGGATCAGAAGTAACCCAATGGGCGGTTATC    498
                     |.||.||.||.||.||||||||.|||||.||.||.|||||||||||.||.
RBAM_028150__    434 TCCCGACGACTGCGGGAACAGGTTCAGAGGTCACACAATGGGCGGTCATT    483

BSNT_04566___    499 ACAGATGAAGAAAGAGAATTCAAATTCAACACGGGCGGTCCGCTGATTGC    548
                     ||||||||.|||||||||||.||||||||.||||||||.|||||.||.||
RBAM_028150__    484 ACAGATGAGGAAAGAGAATTTAAATTCAATACGGGCGGACCGCTTATCGC    533

BSNT_04566___    549 AGCGCACTTGACCATCATTGATCCTGAGCTTCATGTTTCAATGCCTCCGC    598
                     .|||||.||.||..|||||||.||||||||.||....||.||||||||||
RBAM_028150__    534 CGCGCATTTAACAGTCATTGACCCTGAGCTGCACACGTCCATGCCTCCGC    583

BSNT_04566___    599 ATGTAACAGCTATGACGGGAATTGATGCGCTCGCCCATGCCATTGAGTGC    648
                     ||||.||.||.|||||.||.|||||.||.||.||.||.|||||.||||||
RBAM_028150__    584 ATGTGACGGCCATGACAGGTATTGACGCACTTGCGCACGCCATCGAGTGC    633

BSNT_04566___    649 TATACAATGAAATTTGCACAGCCAATCACGGATGCGGTTGCCTTAATGGC    698
                     |||||.||||||||.||.|||||.|||||.|||||.||.||.||||||||
RBAM_028150__    634 TATACGATGAAATTCGCGCAGCCGATCACTGATGCCGTCGCTTTAATGGC    683

BSNT_04566___    699 GATTGAGTATGCCGCTCATTACATTAAGAGGGCATTTGCTGACGGAGAGG    748
                     .|||||.|||||.||.|||||.||||||.|.||.|||||.||||||||||
RBAM_028150__    684 CATTGAATATGCGGCGCATTATATTAAGCGCGCGTTTGCGGACGGAGAGG    733

BSNT_04566___    749 ATCTGGAAGCAAGGTACGGAATGGCGCAGGCTGCGATGCTTGCCGGTCTT    798
                     ||.||||||||||.|||||.|||||||||||.||||||||||||||.|||
RBAM_028150__    734 ATTTGGAAGCAAGATACGGCATGGCGCAGGCGGCGATGCTTGCCGGCCTT    783

BSNT_04566___    799 TCTTACGGAAGTGAATCAGCGGGCGCGGCTCATGCGATGAGCCAAACGCT    848
                     ||.|||||.|||||||||||.||||||||.||||||||||||||.|||||
RBAM_028150__    784 TCATACGGCAGTGAATCAGCAGGCGCGGCGCATGCGATGAGCCAGACGCT    833

BSNT_04566___    849 TGGCGGTATTATCCCAGTCGCTCACGGCCAATGTGTAGCGGCGATGATGG    898
                     .|||||.||.|||||.|||||||||||.|||||.||.||.||.|||||||
RBAM_028150__    834 CGGCGGCATCATCCCTGTCGCTCACGGACAATGCGTCGCAGCTATGATGG    883

BSNT_04566___    899 GCCCTGTCATGGAATACAACTGGAAGGGCTATCCTGAGAAGTTTGCGCGT    948
                     |.||.||.|||||||||||||||||.||||||||.||.||.||.||.||.
RBAM_028150__    884 GGCCGGTAATGGAATACAACTGGAAAGGCTATCCGGAAAAATTCGCCCGC    933

BSNT_04566___    949 ATTGCGAAAGCGTTCGGTATTGATACAAGCAAGATGACAACAGAAGAAGC    998
                     ||.||.|||||.|||||.||.|||||||||||.||||||||.||||||||
RBAM_028150__    934 ATCGCCAAAGCATTCGGAATCGATACAAGCAACATGACAACCGAAGAAGC    983

BSNT_04566___    999 TGCGAAAGCATCTGTCAATTGGATGTATGATCTGGTCGAAGATTTAGAAG   1048
                     .||.|||||.||.|||||.||||||||||||||.||..||||||||||.|
RBAM_028150__    984 GGCAAAAGCGTCCGTCAACTGGATGTATGATCTTGTAAAAGATTTAGAGG   1033

BSNT_04566___   1049 TGCCGACTTTAGAAGAGCAGGGAGTATCACCTGATATGATCGAACGCTTG   1098
                     ||||||.|||||||||.||.||.||.||.||.||.|||||.|||||.||.
RBAM_028150__   1034 TGCCGAGTTTAGAAGAACAAGGTGTGTCTCCGGACATGATTGAACGTTTA   1083

BSNT_04566___   1099 TCTAAAGAAGCTATGAAAGATCCGCAAACCTTCGGAAACCCTAGAGATTT   1148
                     ||.||||||||.|||||||||||||||||.||||||||.||.||||||||
RBAM_028150__   1084 TCAAAAGAAGCCATGAAAGATCCGCAAACTTTCGGAAATCCAAGAGATTT   1133

BSNT_04566___   1149 AAATGAAAAAGCATACAACTGGATCTACAAGCGCTGCTTTAACCTTACGC   1198
                     .|||||.|||||||||||||||||.|||||.|||||||||.||.|.||||
RBAM_028150__   1134 GAATGAGAAAGCATACAACTGGATTTACAAACGCTGCTTTGACTTAACGC   1183

BSNT_04566___   1199 CTAAAACGGTATAA   1212
                     |.||||||||||||
RBAM_028150__   1184 CGAAAACGGTATAA   1197


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