Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04567 and RBAM_028160

See Amino acid alignment / Visit BSNT_04567 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:01
# Commandline: needle
#    -asequence dna-align/BSNT_04567___gbsA.1.9828.seq
#    -bsequence dna-align/RBAM_028160___gbsA.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04567___gbsA-RBAM_028160___gbsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04567___gbsA-RBAM_028160___gbsA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04567___gbsA
# 2: RBAM_028160___gbsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1481
# Identity:    1180/1481 (79.7%)
# Similarity:  1180/1481 (79.7%)
# Gaps:          16/1481 ( 1.1%)
# Score: 4638.0
# 
#
#=======================================

BSNT_04567___      1 ATGAGTCAAA---CATTATTCATTGACGGAGAATGGATCAGTGCCGAAAA     47
                     ||||| ||||   |.||||  ||.|.|||.|.||||||||||||.|||||
RBAM_028160__      1 ATGAG-CAAAACGCTTTAT--ATCGGCGGCGGATGGATCAGTGCAGAAAA     47

BSNT_04567___     48 AGAACAGATCCGCAGTATTATCAACCCATTTAATCAAGAAGAAATTGCAA     97
                     |.||||||.||||.||||.||.||.|||||||||||||||||||||||||
RBAM_028160__     48 AAAACAGACCCGCCGTATCATTAATCCATTTAATCAAGAAGAAATTGCAA     97

BSNT_04567___     98 CTGTAAGCGAGGGAGGGCGAGAGGACGCCATCAAAGCAATCGCAGCCGCA    147
                     |.|||.||||.||||..||..|.||.||..|.|||||.|||||.||.||.
RBAM_028160__     98 CGGTATGCGAAGGAGATCGGAACGATGCGGTGAAAGCCATCGCCGCAGCC    147

BSNT_04567___    148 CGCAGAGCATTTGACAAAGGAGAATGGTCATCGCTATCCGGGCTTGAACG    197
                     .|.|.|||||||||..||||.||.|||.|...|||.||||||||.||.||
RBAM_028160__    148 AGAAAAGCATTTGATGAAGGGGAGTGGCCGGTGCTTTCCGGGCTCGAGCG    197

BSNT_04567___    198 CGGAAAAATTGTTCTGAAAATTGCGGAATTAATCAGACGTGATCTTGAGG    247
                     ||||.||.|||||||||||||||||||||||||||||||.|||||..|.|
RBAM_028160__    198 CGGACAATTTGTTCTGAAAATTGCGGAATTAATCAGACGCGATCTGAACG    247

BSNT_04567___    248 AGCTGGCTGAGCTTGAATCTCTTGATACAGGAAAAACACTCGAAGAAAGC    297
                     |..|.||||||||.|||||.||.||||||||||||||..|.||||||||.
RBAM_028160__    248 AATTAGCTGAGCTGGAATCGCTCGATACAGGAAAAACGATTGAAGAAAGT    297

BSNT_04567___    298 AAGGCCGATATGGACGATATCGCCAATGTTTTTCAATATTACGCCGGCTT    347
                     ||.|||||||||||.||||||||.|||||.|||||||||||.|||||.||
RBAM_028160__    298 AAAGCCGATATGGATGATATCGCAAATGTATTTCAATATTATGCCGGTTT    347

BSNT_04567___    348 GGCAGACAAAGATGGCGGAGAGATCGTTTCATCTCCGATTCCTGATTCAG    397
                     |||.||.|||||.||.||.|||.||.||||||||||||||||.|||||.|
RBAM_028160__    348 GGCGGATAAAGACGGAGGCGAGGTCATTTCATCTCCGATTCCCGATTCCG    397

BSNT_04567___    398 AAAGCAAAATTATTAGAGAGCCAATCGGGGTTTGCGGCCAGATCACTCCA    447
                     .|||.|||||..|.||||||||.||.||.||.|||||.||.||.||.||.
RBAM_028160__    398 TAAGTAAAATCGTCAGAGAGCCCATTGGCGTATGCGGACAAATTACGCCG    447

BSNT_04567___    448 TGGAATTATCCGCTCCTTCAAGCGAGCTGGAAAATCGCCCCTGCACTGGC    497
                     |||||.||||||||||||||.|||||||||||||||||.||.||.||.||
RBAM_028160__    448 TGGAACTATCCGCTCCTTCAGGCGAGCTGGAAAATCGCTCCCGCTCTTGC    497

BSNT_04567___    498 TGCAGGAAACACAATCGTCATGAAGCCGAGTGAGATTACGCCGCTGACGA    547
                     .||.||||||||.|||||..|.||||||||.||||||||.||||||||.|
RBAM_028160__    498 GGCCGGAAACACGATCGTTTTAAAGCCGAGCGAGATTACTCCGCTGACAA    547

BSNT_04567___    548 CAATCAAAGTCTTTAAGCTGATGGAAGAAGCCGGTGTACCAAAAGGTGTC    597
                     |.||.|||||||||.|..|.||.||||||||||||.|.||.|||||.|||
RBAM_028160__    548 CCATTAAAGTCTTTCAATTAATAGAAGAAGCCGGTATTCCGAAAGGGGTC    597

BSNT_04567___    598 GCAAATCTTGTCCTTGGACCGGGAGCCACAGTGGGCGACGAGCTTGCCGT    647
                     ||.|||||.||.||.||.|||||.|||.|.||.|||||||||||.||...
RBAM_028160__    598 GCCAATCTCGTGCTGGGGCCGGGCGCCTCTGTCGGCGACGAGCTGGCGAG    647

BSNT_04567___    648 AAACAAAGACGTCGATTTGATTTCGTTTACGGGCGGAATTGAAACAGGCA    697
                     ||||...|||||||||.||.|.||.|||||||||||||||||||||||||
RBAM_028160__    648 AAACCTCGACGTCGATCTGGTCTCTTTTACGGGCGGAATTGAAACAGGCA    697

BSNT_04567___    698 AAAAAATCATGCGGGCGGCAAGCGGAAACGTCAAAAAAATCGCCCTTGAA    747
                     ||||||||||||.||||||||||||.||.||.|||||.||.|||||.||.
RBAM_028160__    698 AAAAAATCATGCAGGCGGCAAGCGGCAATGTGAAAAAGATTGCCCTGGAG    747

BSNT_04567___    748 CTTGGCGGGAAAAACCCAAATATTGT-TTTCAAGGACGCGGATTTAGAAG    796
                     ||||||||.|||||.||.|||||.|| |||||| ||.||.|||.|.|||.
RBAM_028160__    748 CTTGGCGGCAAAAATCCGAATATCGTATTTCAA-GATGCAGATCTCGAAA    796

BSNT_04567___    797 TTGCGGTTGATCAGGCCTTAAACGCTGTATTTTTCCACGCCGGCCAAGTA    846
                     ..||.|..|||||.||..|.|||||.||.||||||||.|||||||||||.
RBAM_028160__    797 CAGCTGCAGATCAAGCGCTGAACGCCGTGTTTTTCCATGCCGGCCAAGTT    846

BSNT_04567___    847 TGCTCTGCAGGTTCCCG-CTTGCTT-GTTGAGGATGCCATTCATGATCAA    894
                     ||.||.|||||.||.|| |||  || ||.||.||.||||||||||||.||
RBAM_028160__    847 TGTTCGGCAGGGTCACGTCTT--TTGGTGGACGAAGCCATTCATGATGAA    894

BSNT_04567___    895 TTTTTGGCGGAGCTGGTCAAACGGGCAAAACGCATAAAACTCGGAAACGG    944
                     |||||.||.||||||.||||.||..|.||||||||.|||.|.||||||||
RBAM_028160__    895 TTTTTAGCCGAGCTGATCAAGCGCACGAAACGCATCAAATTAGGAAACGG    944

BSNT_04567___    945 TTTTCATGCTGAGACAGAAAGCGGTCCGCTTATTTCGGCGGAGCACAGGG    994
                     ||||||||..||.||.||||||||||||||.|||||.||.|||||..|||
RBAM_028160__    945 TTTTCATGAAGATACGGAAAGCGGTCCGCTGATTTCCGCCGAGCATCGGG    994

BSNT_04567___    995 CAAAGGTAGAAAAATATGTAGAGATCGGAATAGAGGAAGGCGCGAAGCTG   1044
                     |.||.||.||||||||.|||||.|||||.||.||.|||||.||.||.|||
RBAM_028160__    995 CCAAAGTCGAAAAATACGTAGAAATCGGCATCGAAGAAGGGGCAAAACTG   1044

BSNT_04567___   1045 GAGACAGGAGGCAAACGCCCGGAAGACCCTGCGCTTCAAAACGGCTTTTT   1094
                     ||.|||||.||||||||.||.||.||.||.||.|||||||||||.||.||
RBAM_028160__   1045 GAAACAGGCGGCAAACGTCCTGATGATCCCGCCCTTCAAAACGGTTTCTT   1094

BSNT_04567___   1095 CTATGAACCTACTATTTTCTCAAACTGTAATTCTGACATGAGAATCGTTC   1144
                     |||||||||||||||||||||||||||.||.|||||.|||.|.||.||.|
RBAM_028160__   1095 CTATGAACCTACTATTTTCTCAAACTGCAAGTCTGATATGCGGATAGTCC   1144

BSNT_04567___   1145 AGGAAGAGGTTTTCGGTCCGGTATTGACAGTCGAAACCTTCAGCTCTGAA   1194
                     |.||.|||.|.|||||.||.||.||.|||||.||..|.||....||||||
RBAM_028160__   1145 AAGAGGAGATCTTCGGCCCCGTTTTAACAGTTGAGTCATTTTCTTCTGAA   1194

BSNT_04567___   1195 GAAGAGGTAATCGAG-CTTGCGAATGATACCATCTATGGCTTGGCTGGAG   1243
                     |||||.||.||| || |||||.||.||||||||.||.||..||||.||||
RBAM_028160__   1195 GAAGAAGTGATC-AGACTTGCCAACGATACCATTTACGGGCTGGCCGGAG   1243

BSNT_04567___   1244 CGGTATGGTCAAAAGACATTGAAAAGTGCGAACGGGTAGCAGCCCGCTTG   1293
                     |||||||||||||.||.||||||||.||||||||.|||||.|||....||
RBAM_028160__   1244 CGGTATGGTCAAAGGATATTGAAAAATGCGAACGCGTAGCCGCCAAACTG   1293

BSNT_04567___   1294 AGAATGGGAACCGTTTGGATCAACGATTTTCATCCGTACTTTGCACAAGC   1343
                     .|.||||||||.||.||||||||.|||||.||.|||||.||.||.|||||
RBAM_028160__   1294 CGGATGGGAACGGTATGGATCAATGATTTCCACCCGTATTTCGCGCAAGC   1343

BSNT_04567___   1344 GCCATGGGGCGGATATAAGCAATCCGGGTTCGGACGCGAGCTTGGAAAAA   1393
                     ||||||||||||.||.||.|||||.||.|||||.|||||.||.||.||||
RBAM_028160__   1344 GCCATGGGGCGGGTACAAACAATCGGGCTTCGGCCGCGAACTCGGCAAAA   1393

BSNT_04567___   1394 TAGGCCTTGAAGAATACACAGAAGTCAAACATGTATACCGCAATACAAAA   1443
                     |.||.||.|||||||||||.|||.||||||||.|.||||||||.||.|||
RBAM_028160__   1394 TCGGTCTGGAAGAATACACGGAAATCAAACATATTTACCGCAACACGAAA   1443

BSNT_04567___   1444 CCGGCAGCGGTTAACTGG-TTCAATTCATAA   1473
                     ||.|||.|.||.|||||| ||||| .|||||
RBAM_028160__   1444 CCTGCACCCGTGAACTGGTTTCAA-GCATAA   1473


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