Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04610 and RBAM_028390
See
Amino acid alignment /
Visit
BSNT_04610 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:03
# Commandline: needle
# -asequence dna-align/BSNT_04610___yugP.1.9828.seq
# -bsequence dna-align/RBAM_028390___yugP.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04610___yugP-RBAM_028390___yugP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04610___yugP-RBAM_028390___yugP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04610___yugP
# 2: RBAM_028390___yugP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 683
# Identity: 573/683 (83.9%)
# Similarity: 573/683 (83.9%)
# Gaps: 10/683 ( 1.5%)
# Score: 2422.0
#
#
#=======================================
BSNT_04610___ 1 ATGCTGTTTATATTTTTAACAATAGCCGCATTGGGATTGTCGTTTTGGGC 50
|||||||||||.|||||||||||.||.|||||||||||||||||||||||
RBAM_028390__ 1 ATGCTGTTTATCTTTTTAACAATTGCTGCATTGGGATTGTCGTTTTGGGC 50
BSNT_04610___ 51 ACAATTTAAAGTAAAGAGCAACTTTGAAAAATATTCAAAAGTGGAAGCCT 100
||||||||||||.||.|||||.|||.|.|||||.|||.|.||.|||||.|
RBAM_028390__ 51 ACAATTTAAAGTGAAAAGCAATTTTCAGAAATACTCAGACGTAGAAGCTT 100
BSNT_04610___ 101 C----AAGCGGACGTACAGGGGCAGAAACGGCAAGACGGATTTTAGATAT 146
| .|||||||| |||||.||||||||||||||||||.|.|||||
RBAM_028390__ 101 CCAGTCAGCGGACG----GGGGCGGAAACGGCAAGACGGATTCTTGATAT 146
BSNT_04610___ 147 AAACGGTCTTTACGACGTGCCGGTCGAACCGGTAAGAGGCACTTTAACAG 196
.||||||.|.||.||.||||||||.|||||||||||||||||||||||||
RBAM_028390__ 147 TAACGGTTTATATGATGTGCCGGTAGAACCGGTAAGAGGCACTTTAACAG 196
BSNT_04610___ 197 ACCATTACGACCCGACAAGA-CGGGTGGTGCGTTTATCTGAGCCGGTCTA 245
|||||||||||||||| .|| ||||||||||||||||||||||||||.||
RBAM_028390__ 197 ACCATTACGACCCGAC-GGAGCGGGTGGTGCGTTTATCTGAGCCGGTATA 245
BSNT_04610___ 246 TTACGGCCGCTCAATTTCCGCCATATCCGTAGCTTCCCATGAAGTCGGAC 295
||||||||||||.|||||||||||.|||||.|||||||||||||||||||
RBAM_028390__ 246 TTACGGCCGCTCCATTTCCGCCATTTCCGTCGCTTCCCATGAAGTCGGAC 295
BSNT_04610___ 296 ATGCCTTGCAGCATCAGGAGTCATATGGTGCGCTTGTGCTGAGACATAAA 345
||||.||||||||||||||.|||||.||.||||||||||||||.||.|||
RBAM_028390__ 296 ATGCTTTGCAGCATCAGGAATCATACGGCGCGCTTGTGCTGAGGCACAAA 345
BSNT_04610___ 346 ATCTTCCCAGTCGTGAATTTTGCATCCGGTGTAGCTCCTTTGCTTTTCTT 395
||.||.||.|||||.||||||||.|||||.||.||.|||.||||||||||
RBAM_028390__ 346 ATTTTTCCGGTCGTCAATTTTGCCTCCGGGGTCGCCCCTCTGCTTTTCTT 395
BSNT_04610___ 396 AGGAGGCATGCTTCTCGGCAGCCTGAATTTGATCGGGCTTGGCATCATAC 445
.||.||.|||||.||.||||||.||||.||.|||||.||.|||||.||..
RBAM_028390__ 396 GGGCGGGATGCTCCTGGGCAGCTTGAACTTAATCGGACTCGGCATTATTT 445
BSNT_04610___ 446 TGTTTTCAGCGGCAGTCTTTTTCCAGCTGATTACATTGCCTGTCGAATTC 495
|||||||.||.||.||.|||||||||||..|.|||.||||||||||.||.
RBAM_028390__ 446 TGTTTTCGGCCGCTGTTTTTTTCCAGCTTGTCACACTGCCTGTCGAGTTT 495
BSNT_04610___ 496 AATGCAAGTTCACGTGCGAAGCAGATTATTGTGTCAGAAGGATTCATCCG 545
|||||.||..|..|.|||||||.||||||.|||||.|||||||||||.||
RBAM_028390__ 496 AATGCCAGCGCGAGGGCGAAGCGGATTATCGTGTCGGAAGGATTCATTCG 545
BSNT_04610___ 546 AAACAATGAAGAAAATGGGGTAAATAAAGTGCTGAGTGCTGCTGCCTTAA 595
.||||.|||||||.|.||.||.|||||||||||||..||.||.||..|.|
RBAM_028390__ 546 CAACAGTGAAGAACACGGCGTGAATAAAGTGCTGAACGCCGCCGCGCTGA 595
BSNT_04610___ 596 CGTATGTGGCCGCCGCCCTGGTTTCCCTGTTTGAACTACTTCGTTTTGTG 645
||||||||||.||.||.||.|||||..|.||.||.||.||||||||||||
RBAM_028390__ 596 CGTATGTGGCTGCGGCGCTCGTTTCATTATTCGAGCTGCTTCGTTTTGTG 645
BSNT_04610___ 646 ATGATTTTCTTAAACGGTCGTGATGAGAATTAA 678
||||||||||||||.||||||||||||||||||
RBAM_028390__ 646 ATGATTTTCTTAAATGGTCGTGATGAGAATTAA 678
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.