Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04620 and RBAM_028460
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:04
# Commandline: needle
# -asequence dna-align/BSNT_04620___yugK.1.9828.seq
# -bsequence dna-align/RBAM_028460___yugK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04620___yugK-RBAM_028460___yugK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04620___yugK-RBAM_028460___yugK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04620___yugK
# 2: RBAM_028460___yugK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1173
# Identity: 985/1173 (84.0%)
# Similarity: 985/1173 (84.0%)
# Gaps: 0/1173 ( 0.0%)
# Score: 4173.0
#
#
#=======================================
BSNT_04620___ 1 ATGGAAAATTTCACTTATTATAATCCGACAAAGCTGATTTTTGGAAAAGG 50
|||||.||.||.||.||.||.||||||||.||.||||||||.||||||||
RBAM_028460__ 1 ATGGAGAACTTTACGTACTACAATCCGACGAAACTGATTTTCGGAAAAGG 50
BSNT_04620___ 51 TCAGCTTGAACAATTAAGAAAAGAATTCAAACGATACGGCAAGAATGTAC 100
|||..|.||.|||||.|.||||||..|.||.|.||||||.||.||.||.|
RBAM_028460__ 51 TCAAATCGACCAATTGAAAAAAGAGCTGAAGCAATACGGGAAAAACGTGC 100
BSNT_04620___ 101 TGCTTGTTTACGGGGGCGGCAGCATTAAACGCAACGGCCTTTATGATCAA 150
|||||||.|||||.||||||||||||||.||.||||||||.|||||.|||
RBAM_028460__ 101 TGCTTGTATACGGAGGCGGCAGCATTAAGCGAAACGGCCTGTATGACCAA 150
BSNT_04620___ 151 GTCACAGGCATTTTAAAAGAAGAGGGCGCTGTTGTTTATGAGCTGTCAGG 200
||.||||||||.|||||||||||.|||||....|||.|||||||..|.||
RBAM_028460__ 151 GTAACAGGCATCTTAAAAGAAGAAGGCGCAACCGTTCATGAGCTTGCGGG 200
BSNT_04620___ 201 TGTAGAGCCGAACCCGCGTCTTGCAACAGTGAAAAAAGGCATAGACCTTT 250
.||.||.||||||||||||||.|.|||.||.||.|||||.||.||.||.|
RBAM_028460__ 201 CGTTGAACCGAACCCGCGTCTGGAAACGGTAAATAAAGGAATTGAGCTGT 250
BSNT_04620___ 251 GCAGAGAGCATAACATTGATTTTCTGCTTGCTGTCGGCGGAGGCAGTGTG 300
|||||.|||||.|.||||||||.||.||.||.||||||||.||.|||||.
RBAM_028460__ 251 GCAGACAGCATGAGATTGATTTCCTTCTCGCAGTCGGCGGCGGAAGTGTC 300
BSNT_04620___ 301 ATTGACTGTACAAAGGCAATCGCAGCTGGCGTCAAATACGATGGCGACGC 350
||.|||||||||||.||.||.||.||.||.|..|||||.||.||||||||
RBAM_028460__ 301 ATCGACTGTACAAAAGCGATTGCGGCCGGTGCGAAATATGACGGCGACGC 350
BSNT_04620___ 351 TTGGGATATTTTCAGCAAAAAAGTAACAGCGGAGGATGCGCTGCCGTTTG 400
.|||||.||||.|||||||||||||||.|||.||||.|||||.|||||.|
RBAM_028460__ 351 ATGGGACATTTACAGCAAAAAAGTAACGGCGCAGGACGCGCTCCCGTTCG 400
BSNT_04620___ 401 GCACTGTTTTAACGCTTGCTGCAACAGGCTCTGAAATGAACCCTGATTCC 450
||||.||..|.||||||||.||.|||||||||||||||||||||||||||
RBAM_028460__ 401 GCACGGTGCTGACGCTTGCGGCGACAGGCTCTGAAATGAACCCTGATTCC 450
BSNT_04620___ 451 GTGATTACAAACTGGGAAACAAACGAGAAATTTGTATGGGGCAGCAATGT 500
||.||.|||||.||||||||||||||.|||||.|||||||||||||||||
RBAM_028460__ 451 GTTATCACAAATTGGGAAACAAACGAAAAATTCGTATGGGGCAGCAATGT 500
BSNT_04620___ 501 CACTCATCCGCGTTTCTCTATTTTAGACCCTGAAAATACGTTCACCGTTC 550
||||||||||||||||||.||||||||.|||||.|||||.||||.|||||
RBAM_028460__ 501 CACTCATCCGCGTTTCTCCATTTTAGATCCTGAGAATACTTTCAGCGTTC 550
BSNT_04620___ 551 CAGAAAATCAAACAGTATACGGCATGGTTGACATGATGAGCCACGTATTC 600
|.|||||.|||||.|||||||||||||||||.|||||||||||||||||.
RBAM_028460__ 551 CGGAAAACCAAACCGTATACGGCATGGTTGATATGATGAGCCACGTATTT 600
BSNT_04620___ 601 GAACAATACTTCCATAATGTTGAAAACACGCCGCTTCAGGATAGAATGTG 650
||||||||||||||.||||||||||||||||||||||||||.||||||||
RBAM_028460__ 601 GAACAATACTTCCACAATGTTGAAAACACGCCGCTTCAGGACAGAATGTG 650
BSNT_04620___ 651 CTTTGCTGTTTTGCAGACGGTCATCGAAACAGCTCCTAAGCTTCTTGAAG 700
.|||||.||..|.||||||||.||.||||||||.||.||.|||.|.||||
RBAM_028460__ 651 TTTTGCGGTCCTTCAGACGGTAATTGAAACAGCGCCGAAACTTTTGGAAG 700
BSNT_04620___ 701 ATCTGGAAAACTACGAACTTCGTGAAACGATTTTGTATGCTGGTACAATC 750
|.||.||.|||||..|.|.|||||||||||||||.||.||.|||||.|||
RBAM_028460__ 701 ACCTTGAGAACTATAAGCATCGTGAAACGATTTTATACGCGGGTACGATC 750
BSNT_04620___ 751 GCTTTAAACGGCACGCTCCAAATGGGCTACTTTGGTGACTGGGCTTCTCA 800
||.||||||||||||||.|||||||||||.||.||.||.||||||||.||
RBAM_028460__ 751 GCATTAAACGGCACGCTGCAAATGGGCTATTTCGGCGATTGGGCTTCCCA 800
BSNT_04620___ 801 TACAATGGAACACGCTGTTTCAGCTGTATATGATATTCCGCACGCGGGCG 850
|||.|||||.|||||.||.|||||.||.|||||.||.||.||||||||.|
RBAM_028460__ 801 TACGATGGAGCACGCCGTATCAGCGGTTTATGACATCCCTCACGCGGGAG 850
BSNT_04620___ 851 GTTTGGCGATACTGTTCCCAAACTGGATGAGATACACGCTTGATACAAAT 900
|..|.||.||.||||||||.||||||||||||||||||||.|||||||||
RBAM_028460__ 851 GACTTGCAATTCTGTTCCCGAACTGGATGAGATACACGCTGGATACAAAT 900
BSNT_04620___ 901 GTAGGCCGTTTTAAAAACCTTATGCTCAACATGTTTGACATTGATACTGA 950
||||.|||||||||||||||.|||||||||||||||||||||||||||||
RBAM_028460__ 901 GTAGACCGTTTTAAAAACCTGATGCTCAACATGTTTGACATTGATACTGA 950
BSNT_04620___ 951 AGGCAAAACAGATAAAGAAATTGCACTTGAAGGAATCGATAAACTGTCTG 1000
|||||||||.||||||||||||||.||||||||.|||||||||.||||.|
RBAM_028460__ 951 AGGCAAAACGGATAAAGAAATTGCGCTTGAAGGGATCGATAAATTGTCCG 1000
BSNT_04620___ 1001 CGTTCTGGACAAGCCTCGGTGCGCCTTCTCGTCTTGCTGATTACAATATT 1050
|||||||||||||||||||.||.||.||.||.|||||.|||||..|.||.
RBAM_028460__ 1001 CGTTCTGGACAAGCCTCGGCGCACCGTCCCGCCTTGCGGATTATGACATC 1050
BSNT_04620___ 1051 GGAGAAGAAAAGCTTGAGCTGATTGCTGATATCGCAGCCAAGGAAATGGA 1100
||.|||||.||||||||||||||.||.||.|||||.||.||.||||||||
RBAM_028460__ 1051 GGTGAAGACAAGCTTGAGCTGATCGCAGACATCGCTGCAAAAGAAATGGA 1100
BSNT_04620___ 1101 ACACGGCGGCTTCGGCAACTTCCAAAAACTGAACAAAGATGACGTGCTTG 1150
|.|||||||.||||||||.||||||||||||||||||||||||||.||||
RBAM_028460__ 1101 ATACGGCGGATTCGGCAATTTCCAAAAACTGAACAAAGATGACGTACTTG 1150
BSNT_04620___ 1151 CCATCCTTCGCGCGTCTCTATAA 1173
|||||.|....|||||.||.|||
RBAM_028460__ 1151 CCATCTTAAAGGCGTCGCTGTAA 1173
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